RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ERP44Q9BS26 406 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 PARVGQ9HBI0 331 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 NR2E3Q9Y5X4 410 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 DAPK3O43293 454 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 PGM3O95394 542 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 BCAP31P51572 246 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 ZNF132P52740 706 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 SLC27A3Q5K4L6 730 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 ACAD11Q709F0 780 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 FASTKD5Q7L8L6 764 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 SFR1Q86XK3 245 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 PASD1Q8IV76 773 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 METTL13Q8N6R0 699 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 NAGPAQ9UK23 515 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 SATB2Q9UPW6 733 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 UTP11Q9Y3A2 253 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 TELO2Q9Y4R8 837 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 TLL2Q9Y6L7 1015 aa12.89□□□□□ -0.35
SMARCA4-217ENST00000591595 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 ZNF862O60290 1169 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 GCNT3O95395 438 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 S100BP04271 92 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 ABCB4P21439 1286 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 HOXD13P35453 343 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 CASP5P51878 434 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 NDUFA5Q16718 116 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 HSP90AA5PQ58FG0 334 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 ECSITQ9BQ95 431 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 MOSPD1Q9UJG1 213 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 SCN7AQ01118 1682 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 ZBTB5O15062 677 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 PPP1R11O60927 126 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 MED24O75448 989 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 HOXA7P31268 230 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 SERPINB6P35237 376 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 PPP2R5CQ13362 524 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 SPDYCQ5MJ68 293 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 AGAP9Q5VTM2 703 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 GANQ9H2C0 597 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 GCNT4Q9P109 453 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 SERPINB13Q9UIV8 391 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 ZBTB21Q9ULJ3 1066 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
SMARCA4-217ENST00000591595 CHRNB1P11230 501 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 PABPC1P11940 636 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 ITGA4P13612 1032 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 DDX5P17844 614 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 PCSK6P29122 969 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 GJB7Q6PEY0 223 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 GLT8D2Q9H1C3 349 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 FKBP14Q9NWM8 211 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 AGTP01019 485 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 ACADSBP45954 432 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 PCYT1AP49585 367 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 RAB15P59190 212 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 C10orf76Q5T2E6 689 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 PRICKLE1Q96MT3 831 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 LRRC37BQ96QE4 947 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 FNBP1Q96RU3 617 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 CELF4Q9BZC1 486 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 KCTD10Q9H3F6 313 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 ZNF304Q9HCX3 659 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 TRNAU1APQ9NX07 287 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 WASF2Q9Y6W5 498 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 SFI1A8K8P3 1242 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 CALUO43852 315 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 ZBED4O75132 1171 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 TRMUO75648 421 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 SLURP2P0DP57 97 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 ACVR2BQ13705 512 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 EDRF1Q3B7T1 1238 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 ANKMY2Q8IV38 441 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 KLHL4Q9C0H6 718 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 PLGRKTQ9HBL7 147 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 DAGLAQ9Y4D2 1042 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 SLC30A1Q9Y6M5 507 aa12.87□□□□□ -0.35
SMARCA4-217ENST00000591595 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 TMEM114B3SHH9 223 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 NDC80O14777 642 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 CNOT3O75175 753 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 PON1P27169 355 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 ZNF76P36508 570 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 HSD17B4P51659 736 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 POLGP54098 1239 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 PSMC6P62333 389 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms