RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 CDH16O75309 829 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 URODP06132 367 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 PRAMEP78395 509 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 NCAPHQ15003 741 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 HIF1AQ16665 826 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 RNF208Q9H0X6 261 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 FAM205CA6NFA0 338 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 HNRNPCL2B2RXH8 293 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 ANKRD65E5RJM6 399 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 PI4K2BG5E9Z4 385 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 PHF2O75151 1096 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 ITIH2P19823 946 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 HIC1Q14526 733 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 ARMC2Q8NEN0 867 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 TARS2Q9BW92 718 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 ABHD16BQ9H3Z7 469 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 EML4Q9HC35 981 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 E5RI56 91 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 PDHA1P08559 390 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 TGFB3P10600 412 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 IL10P22301 178 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 OAZ1P54368 228 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 TROAPQ12815 778 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 NOGQ13253 232 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 RAB42Q8N4Z0 105 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 CCNYL1Q8N7R7 359 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 ULK4Q96C45 1275 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 OLA1Q9NTK5 396 aaKnown RBP13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 CHCHD3Q9NX63 227 aaKnown RBP13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 GPRC5DQ9NZD1 345 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 ADA2Q9NZK5 511 aa13.96□□□□□ -0.18
SMARCA4-216ENST00000591545 ANP32DO95626 131 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 HMBSP08397 361 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ACTN3Q08043 901 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 IMPG1Q17R60 797 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 RCOR2Q8IZ40 523 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 DFFAO00273 331 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 MSH4O15457 936 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 DDX5P17844 614 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 TBCCQ15814 346 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 EDRF1Q3B7T1 1238 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ZBTB41Q5SVQ8 909 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 METTL7BQ6UX53 244 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ADSSL1Q8N142 457 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ASAP3Q8TDY4 903 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 IDI2Q9BXS1 227 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 TRIM54Q9BYV2 358 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 TRABDQ9H4I3 376 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 VTA1Q9NP79 307 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 C2CD2LO14523 706 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 CYP26A1O43174 497 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 MUTP22033 750 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 TYK2P29597 1187 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 MAP3K10Q02779 954 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ZNF473Q8WTR7 871 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 SH3KBP1Q96B97 665 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 SLC7A5P2Q9GIP4 190 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 UNC45AQ9H3U1 944 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ZCCHC17Q9NP64 241 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 TMEM39AQ9NV64 488 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 STX18Q9P2W9 335 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 CFAP69A5D8W1 941 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 GNL1P36915 607 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 SERPINB9P50453 376 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 PPIL2Q13356 520 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 TDRD10Q5VZ19 366 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 E4F1Q66K89 784 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ANKRD40Q6AI12 368 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 STK33Q9BYT3 514 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ROPN1BQ9BZX4 212 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 RANBP17Q9H2T7 1088 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 ROPN1Q9HAT0 212 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 XPNPEP3Q9NQH7 507 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 SLC4A7Q9Y6M7 1214 aa13.95□□□□□ -0.18
SMARCA4-216ENST00000591545 A0A1W2PQJ5 194 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 ARHGEF9O43307 516 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 PGM1P36871 562 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 HARS2P49590 506 aaKnown RBP13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 CCNI2Q6ZMN8 369 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 RBBP8NLQ8NC74 664 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 KCNV2Q8TDN2 545 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 LRRC1Q9BTT6 524 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 ASCC2Q9H1I8 757 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 SPAG6O75602 509 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 B3GAT3O94766 335 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 RHOBTB3O94955 611 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 KITP10721 976 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 GTF2H3Q13889 308 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 TMEM259Q4ZIN3 620 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 ANKRD7Q92527 254 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 DCUN1D1Q96GG9 259 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 PXMP2Q9NR77 195 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 USP15Q9Y4E8 981 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 PSMD3O43242 534 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 MSCO60682 206 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 PYGLP06737 847 aa13.94□□□□□ -0.18
SMARCA4-216ENST00000591545 KLRC1P26715 233 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms