RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TSSK4Q6SA08 328 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 TMC8Q8IU68 726 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 LRRC3Q9BY71 257 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 GPR88Q9GZN0 384 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 DNAJC25Q9H1X3 360 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 SLITRK6Q9H5Y7 841 aa21.02■□□□□ 0.96
TRAF4-216ENST00000586813 A0A0B4J269 797 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 TRAK2O60296 914 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 PLCG1P19174 1290 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 EPHB3P54753 998 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 SLC39A4Q6P5W5 647 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 MSTO1Q9BUK6 570 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 CHRDQ9H2X0 955 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 CPSF3Q9UKF6 684 aaKnown RBP21.01■□□□□ 0.95
TRAF4-216ENST00000586813 SMC3Q9UQE7 1217 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 PIAS3Q9Y6X2 628 aa21.01■□□□□ 0.95
TRAF4-216ENST00000586813 GPR179Q6PRD1 2367 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 A0A1W2PRU2 124 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 MTMR11A4FU01 709 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 HEPACAM2A8MVW5 462 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 ARNTLO00327 626 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 ZNF263O14978 683 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 LILRB5O75023 590 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 BMP15O95972 392 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 KRT18P05783 430 aaKnown RBP21■□□□□ 0.95
TRAF4-216ENST00000586813 NFICP08651 508 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 ODC1P11926 461 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 LILRA4P59901 499 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 GRIN1Q05586 938 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 MYBPC2Q14324 1141 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 MCM6Q14566 821 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 KARSQ15046 597 aaKnown RBP21■□□□□ 0.95
TRAF4-216ENST00000586813 JADE1Q6IE81 842 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 CENPPQ6IPU0 288 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 MFSD6LQ8IWD5 586 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 CD302Q8IX05 232 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 RASSF8Q8NHQ8 419 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 FAM3CQ92520 227 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 RAD54LQ92698 747 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 FAM212AQ96EL1 285 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 FIZ1Q96SL8 496 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 EPC1Q9H2F5 836 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 ZHX3Q9H4I2 956 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 NCDNQ9UBB6 729 aa21■□□□□ 0.95
TRAF4-216ENST00000586813 CEP250Q9BV73 2442 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 KIF26AQ9ULI4 1882 aaPredicted RBP20.99■□□□□ 0.95
TRAF4-216ENST00000586813 TBCAO75347 108 aaKnown RBP20.99■□□□□ 0.95
TRAF4-216ENST00000586813 LONP1P36776 959 aaKnown RBP20.99■□□□□ 0.95
TRAF4-216ENST00000586813 ALDH1A3P47895 512 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 MCM2P49736 904 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 C9orf57Q5W0N0 161 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 TTC9BQ8N6N2 239 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 ATAD1Q8NBU5 361 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 E2F7Q96AV8 911 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 RSPRY1Q96DX4 576 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 SENP8Q96LD8 212 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 TMEM209Q96SK2 561 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 IER2Q9BTL4 223 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 SMG5Q9UPR3 1016 aaKnown RBP20.99■□□□□ 0.95
TRAF4-216ENST00000586813 SLC27A5Q9Y2P5 690 aa20.99■□□□□ 0.95
TRAF4-216ENST00000586813 DENND4CQ5VZ89 1909 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 PAX3P23760 479 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 NMT1P30419 496 aaKnown RBP20.98■□□□□ 0.95
TRAF4-216ENST00000586813 ABCD1P33897 745 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 GTF2BQ00403 316 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 TMEM132DQ14C87 1099 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 STXBP5Q5T5C0 1151 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 LARP1BQ659C4 914 aaKnown RBP20.98■□□□□ 0.95
TRAF4-216ENST00000586813 OR10T2Q8NGX3 314 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 FAM126AQ9BYI3 521 aaPredicted RBP20.98■□□□□ 0.95
TRAF4-216ENST00000586813 DERAQ9Y315 318 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 ASB3Q9Y575 518 aa20.98■□□□□ 0.95
TRAF4-216ENST00000586813 OBSL1O75147 1896 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 PIRO00625 290 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 TDGF1P13385 188 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 ACOT2P49753 483 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 FCHO2Q0JRZ9 810 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 PUM1Q14671 1186 aaKnown RBP eCLIP20.97■□□□□ 0.95
TRAF4-216ENST00000586813 ARMCX5Q6P1M9 558 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 MAMSTRQ6ZN01 415 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 DGLUCYQ7Z3D6 616 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 BRAPQ7Z569 592 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 YAF2Q8IY57 180 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 LARP4BQ92615 738 aaKnown RBP20.97■□□□□ 0.95
TRAF4-216ENST00000586813 PSMG2Q969U7 264 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 LMAN1LQ9HAT1 526 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 HSFX1Q9UBD0 423 aa20.97■□□□□ 0.95
TRAF4-216ENST00000586813 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.97■□□□□ 0.95
TRAF4-216ENST00000586813 ANO9A1A5B4 782 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 TISP43B9A030 160 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 ANKRD63C9JTQ0 380 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 SOAT2O75908 522 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 CYP11A1P05108 521 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 CCNE1P24864 410 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 MLLT6P55198 1093 aaPredicted RBP20.96■□□□□ 0.95
TRAF4-216ENST00000586813 SF3A1Q15459 793 aaKnown RBP20.96■□□□□ 0.95
TRAF4-216ENST00000586813 ZC2HC1CQ53FD0 456 aaPredicted RBP20.96■□□□□ 0.95
TRAF4-216ENST00000586813 GAREM2Q75VX8 874 aa20.96■□□□□ 0.95
TRAF4-216ENST00000586813 DNAJB7Q7Z6W7 309 aaPredicted RBP20.96■□□□□ 0.95
TRAF4-216ENST00000586813 CSGALNACT1Q8TDX6 532 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms