RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 MYH15Q9Y2K3 1946 aa18.36■□□□□ 0.53
TRIM47-203ENST00000586495 A0A087X0B3 334 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 FRMD3A2A2Y4 597 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 SPTLC1O15269 473 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 CYP11A1P05108 521 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 HSP90AA1P07900 732 aaKnown RBP18.35■□□□□ 0.53
TRIM47-203ENST00000586495 MYL4P12829 197 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 GARTP22102 1010 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 EPHA5P54756 1037 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 KCNA1Q09470 495 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 DUSP4Q13115 394 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 CRELD2Q6UXH1 353 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-203ENST00000586495 STXBP4Q6ZWJ1 553 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 HSCBQ8IWL3 235 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 HS6ST3Q8IZP7 471 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 THEM5Q8N1Q8 247 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 PJA1Q8NG27 643 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 FAM213AQ9BRX8 229 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 GPR88Q9GZN0 384 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 IKZF4Q9H2S9 585 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 CUEDC2Q9H467 287 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 TMEM206Q9H813 350 aa18.35■□□□□ 0.53
TRIM47-203ENST00000586495 TFIP11Q9UBB9 837 aaKnown RBP18.35■□□□□ 0.53
TRIM47-203ENST00000586495 KANSL1LA0AUZ9 987 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 MTMR11A4FU01 709 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 CYB561D2O14569 222 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 YEATS4O95619 227 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 DCNP07585 359 aaKnown RBP18.34■□□□□ 0.53
TRIM47-203ENST00000586495 CCR2P41597 374 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 AMPD3Q01432 767 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 TANGO2Q6ICL3 276 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 CENPPQ6IPU0 288 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 BRSK2Q8IWQ3 736 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
TRIM47-203ENST00000586495 ZNF560Q96MR9 790 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 ASB16Q96NS5 453 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 PYM1Q9BRP8 204 aaKnown RBP18.34■□□□□ 0.53
TRIM47-203ENST00000586495 TNMDQ9H2S6 317 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 HSFX1Q9UBD0 423 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 ASB3Q9Y575 518 aa18.34■□□□□ 0.53
TRIM47-203ENST00000586495 TULP1O00294 542 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-203ENST00000586495 CUTAO60888 179 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 VNN2O95498 520 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 PNPLA4P41247 253 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 CASP5P51878 434 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 SMARCB1Q12824 385 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 SV2CQ496J9 727 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 FAM78AQ5JUQ0 283 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 POTEHQ6S545 545 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 EFCAB13Q8IY85 973 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 ATAD1Q8NBU5 361 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 SMARCD2Q92925 531 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 SAAL1Q96ER3 474 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 DDX23Q9BUQ8 820 aaKnown RBP18.33■□□□□ 0.52
TRIM47-203ENST00000586495 OSBPL6Q9BZF3 934 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 PLA2G2FQ9BZM2 168 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 FOXQ1Q9C009 403 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 DLGAP2Q9P1A6 1054 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 SLC27A5Q9Y2P5 690 aa18.33■□□□□ 0.52
TRIM47-203ENST00000586495 KPNA7A9QM74 516 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 KIAA0391O15091 583 aaKnown RBP18.32■□□□□ 0.52
TRIM47-203ENST00000586495 MOSPD3O75425 235 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 FGF19O95750 216 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 FCARP24071 287 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 TUFMP49411 452 aaKnown RBP18.32■□□□□ 0.52
TRIM47-203ENST00000586495 TFAMQ00059 246 aaKnown RBP18.32■□□□□ 0.52
TRIM47-203ENST00000586495 UBXN2BQ14CS0 331 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 ITIH5Q86UX2 942 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 DEPDC1BQ8WUY9 529 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 DNASE1L2Q92874 299 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 NKD2Q969F2 451 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-203ENST00000586495 TMEM209Q96SK2 561 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 NELL2Q99435 816 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 TRMT61BQ9BVS5 477 aaKnown RBP18.32■□□□□ 0.52
TRIM47-203ENST00000586495 BCO2Q9BYV7 579 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 CRISPLD1Q9H336 500 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 SLITRK6Q9H5Y7 841 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 BRD9Q9H8M2 597 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 RBAKQ9NYW8 714 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-203ENST00000586495 ANK1P16157 1881 aa18.32■□□□□ 0.52
TRIM47-203ENST00000586495 FAM170BA6NMN3 283 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 NCAM2O15394 837 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 EXTL3O43909 919 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 PRPF6O94906 941 aaKnown RBP18.31■□□□□ 0.52
TRIM47-203ENST00000586495 GJA1P17302 382 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 MAGEA9P43362 315 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 VEPH1Q14D04 833 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 TEAD2Q15562 447 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 SLC39A12Q504Y0 691 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 TPRG1Q6ZUI0 275 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 FRMD5Q7Z6J6 570 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 C1orf210Q8IVY1 113 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 IQUBQ8NA54 791 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 OR10T2Q8NGX3 314 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 C2orf15Q8WU43 125 aaKnown RBP18.31■□□□□ 0.52
TRIM47-203ENST00000586495 IRF7Q92985 503 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 PSMG2Q969U7 264 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 E2F7Q96AV8 911 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 ZCWPW1Q9H0M4 648 aa18.31■□□□□ 0.52
TRIM47-203ENST00000586495 DNAJC25Q9H1X3 360 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms