RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 CFAP97Q9P2B7 532 aa4.99□□□□□ -1.61
PPP4R1-227ENST00000583988 DKK2Q9UBU2 259 aa4.99□□□□□ -1.61
PPP4R1-227ENST00000583988 PACSIN3Q9UKS6 424 aa4.99□□□□□ -1.61
PPP4R1-227ENST00000583988 GRID2IPA4D2P6 1211 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 CDHR4A6H8M9 788 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 PRSS29PA6NIE9 313 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 UNC119BA6NIH7 251 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 TPP1O14773 563 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 RHOBTB3O94955 611 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 KRT18P05783 430 aaKnown RBP4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 MYL1P05976 194 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 PROZP22891 400 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 KIF22Q14807 665 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 UTP14CQ5TAP6 766 aaKnown RBP4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 HECTD2Q5U5R9 776 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 DARS2Q6PI48 645 aaKnown RBP4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 ZNF365Q70YC5 407 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 CCAR1Q8IX12 1150 aaKnown RBP4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 LCORLQ8N3X6 602 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 BEND2Q8NDZ0 799 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 CPEB3Q8NE35 698 aaKnown RBP4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 OR56A1Q8NGH5 318 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 PPP1R35Q8TAP8 253 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 PACSIN1Q9BY11 444 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 B3GNT5Q9BYG0 378 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 WDR11Q9BZH6 1224 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 SIK2Q9H0K1 926 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 SERHL2Q9H4I8 314 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 MAP3K2Q9Y2U5 619 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 FPGT-TNNI3KV9GXZ4 949 aa4.98□□□□□ -1.61
PPP4R1-227ENST00000583988 A0A1B0GTW7 788 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 ANO9A1A5B4 782 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 TMEM200CA6NKL6 621 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 GOLIM4O00461 696 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 PHGDHO43175 533 aaKnown RBP4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 NUDT3O95989 172 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 CHEK2O96017 543 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 CFIP05156 583 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 THP07101 528 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 SPATA31D3P0C874 917 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 RHCEP18577 417 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 BMPR1AP36894 532 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 ZEB1P37275 1124 aaPredicted RBP4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 PIK3CGP48736 1102 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 NOMO3P69849 1222 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 RHDQ02161 417 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 BEAN1Q3B7T3 259 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 CCDC93Q567U6 631 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 NOMO2Q5JPE7 1267 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 ARMC6Q6NXE6 501 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 SPATA31D4Q6ZUB0 917 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 TMEM132CQ8N3T6 1108 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 TBC1D15Q8TC07 691 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 ANKS1AQ92625 1134 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 MARS2Q96GW9 593 aaKnown RBP4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 SUCLG2Q96I99 432 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 PNKPQ96T60 521 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 ZNF700Q9H0M5 742 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 RNPEPQ9H4A4 650 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 BRD9Q9H8M2 597 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 ARNT2Q9HBZ2 717 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 GPR35Q9HC97 309 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 PIH1D1Q9NWS0 290 aaKnown RBP4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 DDX20Q9UHI6 824 aaKnown RBP4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 PAXBP1Q9Y5B6 917 aa4.97□□□□□ -1.61
PPP4R1-227ENST00000583988 COL4A3Q01955 1670 aa4.96□□□□□ -1.61
PPP4R1-227ENST00000583988 MARCH11A6NNE9 402 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 ISM1B1AKI9 464 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 AGFG2O95081 481 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 HLA-DOAP06340 250 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 ELANEP08246 267 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 DDX6P26196 483 aaKnown RBP eCLIP4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 MXRA7P84157 204 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 GUCY1B3Q02153 619 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 SLFN5Q08AF3 891 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 TCF15Q12870 199 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 POLD3Q15054 466 aaPredicted RBP4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 CNN3Q15417 329 aaKnown RBP4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 SAFBQ15424 915 aaKnown RBP eCLIP4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 RNF220Q5VTB9 566 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 MAPKAPK5Q8IW41 473 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 ARHGEF19Q8IW93 802 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 SUPT20HQ8NEM7 779 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 PLBD2Q8NHP8 589 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 KBTBD7Q8WVZ9 684 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 SCAMP4Q969E2 229 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 MED15Q96RN5 788 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 RIOX1Q9H6W3 641 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 ZNHIT2Q9UHR6 403 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 SLC45A2Q9UMX9 530 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 NEU2Q9Y3R4 380 aa4.96□□□□□ -1.62
PPP4R1-227ENST00000583988 A0A1W2PPL8 197 aa4.95□□□□□ -1.62
PPP4R1-227ENST00000583988 CCDC78A2IDD5 438 aa4.95□□□□□ -1.62
PPP4R1-227ENST00000583988 A6NNZ2 444 aa4.95□□□□□ -1.62
PPP4R1-227ENST00000583988 FOXN3O00409 490 aaPredicted RBP4.95□□□□□ -1.62
PPP4R1-227ENST00000583988 MATN4O95460 622 aa4.95□□□□□ -1.62
PPP4R1-227ENST00000583988 LMNAP02545 664 aaKnown RBP4.95□□□□□ -1.62
PPP4R1-227ENST00000583988 OCA2Q04671 838 aa4.95□□□□□ -1.62
PPP4R1-227ENST00000583988 RESTQ13127 1097 aa4.95□□□□□ -1.62
PPP4R1-227ENST00000583988 SEMA5AQ13591 1074 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms