RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RNF169Q8NCN4 708 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 IL17RDQ8NFM7 739 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 CAVIN3Q969G5 261 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 MPHOSPH6Q99547 160 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 NDC1Q9BTX1 674 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 NAA15Q9BXJ9 866 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 C22orf23Q9BZE7 217 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 SARS2Q9NP81 518 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 GNL3LQ9NVN8 582 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 USP19O94966 1318 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 RNASET2O00584 256 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 POMCP01189 267 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 HLA-DOAP06340 250 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 IFIT2P09913 472 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 SPATA31D3P0C874 917 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 SLC5A1P13866 664 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 TGM1P22735 817 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 SLC6A4P31645 630 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 PIK3CGP48736 1102 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 BRD3Q15059 726 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 CCDC93Q567U6 631 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 HECTD2Q5U5R9 776 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 EFCAB12Q6NXP0 572 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 SPATA31D4Q6ZUB0 917 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 HTR3DQ70Z44 454 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 DOK3Q7L591 496 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 GDF7Q7Z4P5 450 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 GPR150Q8NGU9 434 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 IL31RAQ8NI17 732 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 BRIX1Q8TDN6 353 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 FBXO41Q8TF61 875 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 TFAP2CQ92754 450 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 PMM1Q92871 262 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 SLC46A2Q9BY10 475 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 CPEB1Q9BZB8 566 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 GSTO2Q9H4Y5 243 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 CNNM1Q9NRU3 951 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 FBXO34Q9NWN3 711 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 SIDT1Q9NXL6 827 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 ANKFY1Q9P2R3 1169 aa5.83□□□□□ -1.48
SMCHD1-205ENST00000581383 NDUFA10O95299 355 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 MYF5P13349 255 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 HDCP19113 662 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 MGAT1P26572 445 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 SLC7A1P30825 629 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 AVPR1BP47901 424 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 RNASE9P60153 205 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 EXOSC9Q06265 439 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 UBXN2BQ14CS0 331 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 POLD3Q15054 466 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 CSRP2Q16527 193 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 ERCC6LQ2NKX8 1250 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 ATXN7L2Q5T6C5 722 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 GPRIN1Q7Z2K8 1008 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 C11orf96Q7Z7L8 435 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 ZFP28Q8NHY6 868 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 ANKS1AQ92625 1134 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 SLC39A13Q96H72 371 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 PHACTR3Q96KR7 559 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 RPS6KC1Q96S38 1066 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 PACSIN1Q9BY11 444 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 ZNF700Q9H0M5 742 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 NUP62CLQ9H1M0 184 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 ZNF768Q9H5H4 540 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 BRD9Q9H8M2 597 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 RSAD1Q9HA92 442 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 PTGFRNQ9P2B2 879 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 SLC45A2Q9UMX9 530 aa5.82□□□□□ -1.48
SMCHD1-205ENST00000581383 PRSS29PA6NIE9 313 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 SLC43A1O75387 559 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 MATN4O95460 622 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 GNAI3P08754 354 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 ALAS1P13196 640 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 NPR1P16066 1061 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 SLC6A2P23975 617 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 GNAI1P63096 354 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 NOMO3P69849 1222 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 METTL24Q5JXM2 366 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 PCSK9Q8NBP7 692 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 NLGN4YQ8NFZ3 816 aaPredicted RBP5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 OR52N2Q8NGI0 321 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 APIPQ96GX9 242 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 TBCBQ99426 244 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 P2RX7Q99572 595 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 LRRC27Q9C0I9 530 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 KIAA1586Q9HCI6 787 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 AKIP1Q9NQ31 210 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 PIH1D1Q9NWS0 290 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 RNF181Q9P0P0 153 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 PHTF1Q9UMS5 762 aa5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.81□□□□□ -1.48
SMCHD1-205ENST00000581383 CDHR4A6H8M9 788 aa5.8□□□□□ -1.48
SMCHD1-205ENST00000581383 NCR1O76036 304 aa5.8□□□□□ -1.48
SMCHD1-205ENST00000581383 GJB1P08034 283 aa5.8□□□□□ -1.48
SMCHD1-205ENST00000581383 NR4A1P22736 598 aa5.8□□□□□ -1.48
SMCHD1-205ENST00000581383 PIK3CBP42338 1070 aa5.8□□□□□ -1.48
SMCHD1-205ENST00000581383 SOX8P57073 446 aa5.8□□□□□ -1.48
SMCHD1-205ENST00000581383 PSMC1P62191 440 aaKnown RBP5.8□□□□□ -1.48
SMCHD1-205ENST00000581383 NHLH2Q02577 135 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms