RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ARMC6Q6NXE6 501 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 RHOUQ7L0Q8 258 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 CFAP52Q8N1V2 620 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 Q8N1X5 172 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 CELF5Q8N6W0 485 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 PCSK9Q8NBP7 692 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 SMOQ99835 787 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 VKORC1Q9BQB6 163 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 MLST8Q9BVC4 326 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 GPR35Q9HC97 309 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 PRDM11Q9NQV5 511 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 DKK2Q9UBU2 259 aa5.75□□□□□ -1.49
SMCHD1-204ENST00000581226 A6NNZ2 444 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 FAM227AF5H4B4 570 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 CHEK2O96017 543 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 FOSP01100 380 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 ADH4P08319 380 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 KCNJ5P48544 419 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 ABHD18Q0P651 414 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 GBX1Q14549 363 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 EMC10Q5UCC4 262 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 PPP4R4Q6NUP7 873 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 USP51Q70EK9 711 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 USP37Q86T82 979 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 ARHGEF19Q8IW93 802 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 KIAA0319LQ8IZA0 1049 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 NACC2Q96BF6 587 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 BOD1Q96IK1 185 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 C8orf48Q96LL4 319 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 ADAM2Q99965 735 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 SIK2Q9H0K1 926 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 ZMAT3Q9HA38 289 aaKnown RBP5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 GALNT9Q9HCQ5 603 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 VSX1Q9NZR4 365 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 AGAP1Q9UPQ3 857 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 HS3ST4Q9Y661 456 aa5.74□□□□□ -1.49
SMCHD1-204ENST00000581226 CCDC195A0A1B0GUA6 201 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 A0A1W2PPL8 197 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 POLRMTO00411 1230 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 SPDEFO95238 335 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 FSHBP01225 129 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 KCNA2P16389 499 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 POU6F2P78424 691 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 TP53BP2Q13625 1128 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 PTPAQ15257 358 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 CYP2A13Q16696 494 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 TAPT1Q6NXT6 567 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 SLC30A10Q6XR72 485 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 CCDC149Q6ZUS6 474 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 MAEAQ7L5Y9 396 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 CHST15Q7LFX5 561 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 COL23A1Q86Y22 540 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 Q8NA96 180 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 DDX17Q92841 729 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 TRIB1Q96RU8 372 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 CNPPD1Q9BV87 410 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 TINAGL1Q9GZM7 467 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 TMEM74BQ9NUR3 256 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 PIH1D1Q9NWS0 290 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 CTTNBP2NLQ9P2B4 639 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 L1RE1Q9UN81 338 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 NEU2Q9Y3R4 380 aa5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMCHD1-204ENST00000581226 CFAP69A5D8W1 941 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 M0QYG6 137 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 PHGDHO43175 533 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 VPS4BO75351 444 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 ZFPL1O95159 310 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 KIF20AO95235 890 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 KITP10721 976 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 FPGSQ05932 587 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 CNN3Q15417 329 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 GEN1Q17RS7 908 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 SRGAP1Q7Z6B7 1085 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 CLNKQ7Z7G1 428 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 DGKHQ86XP1 1220 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 COLGALT2Q8IYK4 626 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 FAM156AQ8NDB6 213 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 NEU4Q8WWR8 484 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 TIFAQ96CG3 184 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 LRIG1Q96JA1 1093 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 MRGPRX1Q96LB2 322 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 WDR11Q9BZH6 1224 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 SERHL2Q9H4I8 314 aa5.72□□□□□ -1.49
SMCHD1-204ENST00000581226 MYADML2A6NDP7 307 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 TOR1BO14657 336 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 TPP1O14773 563 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 SUN1O94901 812 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 ITGAMP11215 1152 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 NPR1P16066 1061 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 GDF5P43026 501 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 VAV2P52735 878 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 USP14P54578 494 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 RPS7P62081 194 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 KIAA0753Q2KHM9 967 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 CD300EQ496F6 205 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 HSP90AB2PQ58FF8 381 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 SWSAP1Q6NVH7 229 aa5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 LARP4BQ92615 738 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-204ENST00000581226 TMEM125Q96AQ2 219 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms