RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 SMARCB1Q12824 385 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 EDRF1Q3B7T1 1238 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 PPM1LQ5SGD2 360 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 RSPO2Q6UXX9 243 aaPredicted RBP17.69■□□□□ 0.42
IFT20-210ENST00000580357 DPH6Q7L8W6 267 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 TRAPPC11Q7Z392 1133 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 TMEM86AQ8N2M4 240 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 SPATA18Q8TC71 538 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 TMC2Q8TDI7 906 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 PARD3BQ8TEW8 1205 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 BORCS6Q96GS4 357 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 C1QTNF1Q9BXJ1 281 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 PIDD1Q9HB75 910 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 GDAP2Q9NXN4 497 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 MAPK8IP1Q9UQF2 711 aa17.69■□□□□ 0.42
IFT20-210ENST00000580357 TCF20Q9UGU0 1960 aaKnown RBP17.69■□□□□ 0.42
IFT20-210ENST00000580357 LOC730098B7Z3J9 87 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 IKBKBO14920 756 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 SPTLC1O15269 473 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 ADAM12O43184 909 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 XYLBO75191 536 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 POU2F2P09086 479 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 PRCPP42785 496 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 CLDN10P78369 228 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 ROR1Q01973 937 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 ADAM9Q13443 819 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 CEP135Q66GS9 1140 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 TCEAL8Q8IYN2 117 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 PLCD3Q8N3E9 789 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 CXorf38Q8TB03 319 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 SMG7Q92540 1137 aaKnown RBP17.68■□□□□ 0.42
IFT20-210ENST00000580357 CCDC127Q96BQ5 260 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 GBP4Q96PP9 640 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 TSG101Q99816 390 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 MTMR12Q9C0I1 747 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 AFF4Q9UHB7 1163 aaKnown RBP17.68■□□□□ 0.42
IFT20-210ENST00000580357 USTQ9Y2C2 406 aa17.68■□□□□ 0.42
IFT20-210ENST00000580357 TIMM13Q9Y5L4 95 aaPredicted RBP17.68■□□□□ 0.42
IFT20-210ENST00000580357 MTCL1Q9Y4B5 1905 aaKnown RBP17.67■□□□□ 0.42
IFT20-210ENST00000580357 PHACTR2O75167 634 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 C8AP07357 584 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 NR2F2P24468 414 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 ATICP31939 592 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 PSMC2P35998 433 aaKnown RBP17.67■□□□□ 0.42
IFT20-210ENST00000580357 ARPP19P56211 112 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 CENPPQ6IPU0 288 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 OR5B17Q8NGF7 314 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 HPDLQ96IR7 371 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 NECAB3Q96P71 396 aaPredicted RBP17.67■□□□□ 0.42
IFT20-210ENST00000580357 SIX4Q9UIU6 781 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 ANK1P16157 1881 aa17.67■□□□□ 0.42
IFT20-210ENST00000580357 VWA8A3KMH1 1905 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 WDR27A2RRH5 827 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 PRRG1O14668 218 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 CETN3O15182 167 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 KRT13P13646 458 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 CPB1P15086 417 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 BFSP1Q12934 665 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 GPR17Q13304 367 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 TRPC3Q13507 836 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 LMBRD2Q68DH5 695 aaPredicted RBP17.66■□□□□ 0.42
IFT20-210ENST00000580357 INTS8Q75QN2 995 aaKnown RBP17.66■□□□□ 0.42
IFT20-210ENST00000580357 OTOP3Q7RTS5 596 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 ADSSL1Q8N142 457 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 TMEM130Q8N3G9 435 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 TOP6BLQ8N6T0 577 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 ACSF2Q96CM8 615 aaPredicted RBP17.66■□□□□ 0.42
IFT20-210ENST00000580357 DHTKD1Q96HY7 919 aaPredicted RBP17.66■□□□□ 0.42
IFT20-210ENST00000580357 RPGRIP1Q96KN7 1286 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 MKNK1Q9BUB5 465 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 POMKQ9H5K3 350 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 WDR6Q9NNW5 1121 aaKnown RBP17.66■□□□□ 0.42
IFT20-210ENST00000580357 HSFX1Q9UBD0 423 aa17.66■□□□□ 0.42
IFT20-210ENST00000580357 XIRP2A4UGR9 3374 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 GOLGA6L22H0YM25 854 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 PSMA7O14818 248 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 RFPL2O75678 378 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 LHX1P48742 406 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 FKBP3Q00688 224 aaKnown RBP17.65■□□□□ 0.42
IFT20-210ENST00000580357 LRRC63Q05C16 580 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 ZCWPW2Q504Y3 356 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 WSCD1Q658N2 575 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 DCP1BQ8IZD4 617 aaKnown RBP17.65■□□□□ 0.42
IFT20-210ENST00000580357 TRIML1Q8N9V2 468 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 SLC7A14Q8TBB6 771 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 C2orf15Q8WU43 125 aaKnown RBP17.65■□□□□ 0.42
IFT20-210ENST00000580357 ZNF516Q92618 1163 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 SYAP1Q96A49 352 aaPredicted RBP17.65■□□□□ 0.42
IFT20-210ENST00000580357 ZNF707Q96C28 371 aaPredicted RBP17.65■□□□□ 0.42
IFT20-210ENST00000580357 CYP4F11Q9HBI6 524 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.42
IFT20-210ENST00000580357 MAN1B1Q9UKM7 699 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 SNX9Q9Y5X1 595 aa17.65■□□□□ 0.42
IFT20-210ENST00000580357 STAU1O95793 577 aaKnown RBP17.64■□□□□ 0.41
IFT20-210ENST00000580357 CST3P01034 146 aaPredicted RBP17.64■□□□□ 0.41
IFT20-210ENST00000580357 LRG1P02750 347 aa17.64■□□□□ 0.41
IFT20-210ENST00000580357 WEE2P0C1S8 567 aa17.64■□□□□ 0.41
IFT20-210ENST00000580357 ALADP13716 330 aa17.64■□□□□ 0.41
IFT20-210ENST00000580357 CASP4P49662 377 aa17.64■□□□□ 0.41
IFT20-210ENST00000580357 VAMP7P51809 220 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms