RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SPATA31A3Q5VYP0 1347 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 PNPLA7Q6ZV29 1317 aa3.12□□□□□ -1.91
COPS3-213ENST00000577210 LRRC14BA6NHZ5 514 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 ZNF785A8K8V0 405 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 RHPN2P1A8MT19 583 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 TRIAP1O43715 76 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 PQBP1O60828 265 aaKnown RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 RPS6KA4O75676 772 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 MATN4O95460 622 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 FOSP01100 380 aaPredicted RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 ATXN1LP0C7T5 689 aaKnown RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 BRAFP15056 766 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 APOBEC3AP31941 199 aaPredicted RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 VIPR2P41587 438 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 SCNN1GP51170 649 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 ZNF135P52742 658 aaPredicted RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 RPS7P62081 194 aaKnown RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 ADAM17P78536 824 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 TAP1Q03518 808 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 UBE4AQ14139 1066 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 PUM1Q14671 1186 aaKnown RBP eCLIP3.11□□□□□ -1.91
COPS3-213ENST00000577210 HLXQ14774 488 aaPredicted RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 LLGL1Q15334 1064 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 INSCQ1MX18 579 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 NRN1LQ496H8 165 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 LONRF3Q496Y0 759 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 Q6ZRM9 215 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 USP37Q86T82 979 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 PPP1R3BQ86XI6 285 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 MAPKAPK5Q8IW41 473 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 ZNF276Q8N554 614 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 SLC17A8Q8NDX2 589 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 OR56A1Q8NGH5 318 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 IL31RAQ8NI17 732 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 SLC25A43Q8WUT9 341 aaPredicted RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 HAS1Q92839 578 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 PHKBQ93100 1093 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 RAB24Q969Q5 203 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 NMD3Q96D46 503 aaKnown RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 MYEOVQ96EZ4 313 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 WWC2-AS2Q96NR7 200 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 TRIB1Q96RU8 372 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 MYOCQ99972 504 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 HEPHQ9BQS7 1158 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 KRTAP3-1Q9BYR8 98 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 C22orf23Q9BZE7 217 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 TINAGL1Q9GZM7 467 aaPredicted RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 ZMAT3Q9HA38 289 aaKnown RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 GALNT9Q9HCQ5 603 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 SLAMF7Q9NQ25 335 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 A1CFQ9NQ94 594 aaKnown RBP3.11□□□□□ -1.91
COPS3-213ENST00000577210 TMEM74BQ9NUR3 256 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 KLHL11Q9NVR0 708 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 FBXO34Q9NWN3 711 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 SRRDQ9UH36 339 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 CPA4Q9UI42 421 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 SHOC2Q9UQ13 582 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 DMTF1Q9Y222 760 aa3.11□□□□□ -1.91
COPS3-213ENST00000577210 A0A1W2PS29 197 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 MBD3L4A6NDZ8 208 aaPredicted RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 MBD3L3A6NE82 208 aaPredicted RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 MYO1FO00160 1098 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 POLRMTO00411 1230 aaKnown RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 BTN3A1O00481 513 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 ORC4O43929 436 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 CFIP05156 583 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 PIM1P11309 404 aaPredicted RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 KCNA2P16389 499 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 ITGALP20701 1170 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 KLRC1P26715 233 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 LRPAP1P30533 357 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 ANXA11P50995 505 aaKnown RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 ARFIP2P53365 341 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 RNASE9P60153 205 aaKnown RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 PSMC1P62191 440 aaKnown RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 SLC13A2Q13183 592 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 TOB2Q14106 344 aaPredicted RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 R3HDM1Q15032 1099 aaKnown RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 IQCB1Q15051 598 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 ZXDCQ2QGD7 858 aaPredicted RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 MGAT5BQ3V5L5 792 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 PREPLQ4J6C6 727 aaPredicted RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 TIGD2Q4W5G0 525 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 USP39Q53GS9 565 aaKnown RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 TEDDM1Q5T9Z0 273 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 C1QL3Q5VWW1 255 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 SP5Q6BEB4 398 aaPredicted RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 CYB5RLQ6IPT4 315 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 RNF207Q6ZRF8 634 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 BEND5Q7L4P6 421 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 CERS3Q8IU89 383 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 ZFPM1Q8IX07 1006 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 YAF2Q8IY57 180 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 CFAP52Q8N1V2 620 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 SVIPQ8NHG7 77 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 LENG9Q96B70 501 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 TIFAQ96CG3 184 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 PGBD4Q96DM1 585 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 MRGPRX1Q96LB2 322 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 MYD88Q99836 296 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms