RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 NELFCDQ8IXH7 590 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 UBALD2Q8IYN6 164 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 IQUBQ8NA54 791 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 GLIS3Q8NEA6 775 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 ITFG1Q8TB96 612 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 ASIC4Q96FT7 647 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 CORO1BQ9BR76 489 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 PYM1Q9BRP8 204 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 CBWD1Q9BRT8 395 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 LRRC27Q9C0I9 530 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 TNMDQ9H2S6 317 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 RBAKQ9NYW8 714 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 CA14Q9ULX7 337 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 PCDHA7Q9UN72 937 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 INSL5Q9Y5Q6 135 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 OBSL1O75147 1896 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 COL4A3Q01955 1670 aa10.95□□□□□ -0.66
GTF3C1-206ENST00000566779 KIF26AQ9ULI4 1882 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 SEC24AO95486 1093 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 KRT19P08727 400 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 LRPAP1P30533 357 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 AMPD3Q01432 767 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 TWF1Q12792 350 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 BFSP1Q12934 665 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 POSTNQ15063 836 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 SPATA1Q5VX52 437 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 C9orf57Q5W0N0 161 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 LMBRD2Q68DH5 695 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 OVOS1Q6IE37 1185 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 CYP26C1Q6V0L0 522 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 RNF19BQ6ZMZ0 732 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 CD302Q8IX05 232 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 EFCAB13Q8IY85 973 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 CEP57L1Q8IYX8 460 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 SIX5Q8N196 739 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 ELMOD1Q8N336 334 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 ZNF461Q8TAF7 563 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 SPATA32Q96LK8 384 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 KXD1Q9BQD3 176 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 TRIM9Q9C026 710 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 ST6GALNAC4Q9H4F1 302 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 DPP3Q9NY33 737 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 CFAP45Q9UL16 551 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 MRPS23Q9Y3D9 190 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 NUMBLQ9Y6R0 609 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 DENND4CQ5VZ89 1909 aa10.94□□□□□ -0.66
GTF3C1-206ENST00000566779 NUP210Q8TEM1 1887 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 SOAT2O75908 522 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 IL18RAPO95256 599 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 RHOP08100 348 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 TMEM191BP0C7N4 346 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 MYL4P12829 197 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 LAMP2P13473 410 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 CEBPBP17676 345 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 CYP3A5P20815 502 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 ADSSP30520 456 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 POLR2BP30876 1174 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 TAF6P49848 677 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 CYP2J2P51589 502 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 WNT7BP56706 349 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 ALCAMQ13740 583 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 FAM26FQ5R3K3 315 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 SLC8B1Q6J4K2 584 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 METTL23Q86XA0 190 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 FAM200AQ8TCP9 573 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 FGF13Q92913 245 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 MCRS1Q96EZ8 462 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 SENP8Q96LD8 212 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 ZNF560Q96MR9 790 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 TMEM209Q96SK2 561 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 SEPT5Q99719 369 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 CUEDC2Q9H467 287 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 SLITRK6Q9H5Y7 841 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 OLFML3Q9NRN5 406 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 IGSF9Q9P2J2 1179 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 DNMT3BQ9UBC3 853 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 SERTAD1Q9UHV2 236 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 CDH7Q9ULB5 785 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 R3HCC1Q9Y3T6 440 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 YIPF1Q9Y548 306 aa10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 MORC2Q9Y6X9 1032 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-206ENST00000566779 TRIOO75962 3097 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 FRMD3A2A2Y4 597 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 M0QZQ0 153 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 CYB561D2O14569 222 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 ITGB3P05106 788 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 GJA1P17302 382 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 NDUFV2P19404 249 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 HOXA9P31269 272 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 LILRA4P59901 499 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 KRT85P78386 507 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 HTR4Q13639 388 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 ZBTB6Q15916 424 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 SLC5A9Q2M3M2 681 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 SV2CQ496J9 727 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 RESP18Q5W5W9 173 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 IQCEQ6IPM2 695 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 PARM1Q6UWI2 310 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 CRELD2Q6UXH1 353 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms