RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZCWPW2Q504Y3 356 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 HDDC2Q7Z4H3 204 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 LRRC6Q86X45 466 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SRRM1Q8IYB3 904 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 ZDHHC14Q8IZN3 488 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 METTL25Q8N6Q8 603 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SERPINB12Q96P63 405 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CTRCQ99895 268 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 FAM207AQ9NSI2 230 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.07□□□□□ -1.928e-7■■■■□ 21.3
CHD9-218ENST00000566029 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 WBP11Q9Y2W2 641 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 PXDNQ92626 1479 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FSCN2O14926 492 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 NDUFB5O43674 189 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CIAO1O76071 339 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 RAPGEF3O95398 923 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MYL6BP14649 208 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MAPK7Q13164 816 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CCNG2Q16589 344 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 OTOAQ7RTW8 1153 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TRIM59Q8IWR1 403 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZC3H3Q8IXZ2 948 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZNF654Q8IZM8 581 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SIX2Q9NPC8 291 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TCP11L1Q9NUJ3 509 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ARMCX3Q9UH62 379 aaPredicted RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 LRRC37A3O60309 1634 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PP2D1A8MPX8 630 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PRMT3O60678 531 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 LDHCP07864 332 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ABHD2P08910 425 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 HSPA6P17066 643 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SLCO1A2P46721 670 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MARSP56192 900 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 SCARF1Q14162 830 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MYLK3Q32MK0 819 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 OGFRL1Q5TC84 451 aaPredicted RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 FBXO31Q5XUX0 539 aaPredicted RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 NEK5Q6P3R8 708 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 KLHDC10Q6PID8 442 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PET117Q6UWS5 81 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TRABD2AQ86V40 505 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ANKLE2Q86XL3 938 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SLC30A5Q8TAD4 765 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SNX19Q92543 992 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CEP19Q96LK0 163 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 STRBPQ96SI9 672 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 EBF3Q9H4W6 596 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZNF696Q9H7X3 374 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MAGEF1Q9HAY2 307 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 GIN1Q9NXP7 522 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CCDC88AQ3V6T2 1871 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TRIM64CA6NLI5 447 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TRMUO75648 421 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 NEK2P51955 445 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CHN2P52757 468 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FOXO4P98177 505 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CYP4A11Q02928 519 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SPOPLQ6IQ16 392 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 BARGINQ6ZT62 677 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CLNKQ7Z7G1 428 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MCF2L2Q86YR7 1114 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 GTF2A1LQ9UNN4 478 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 IVNS1ABPQ9Y6Y0 642 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FCHO1O14526 889 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CAPN1P07384 714 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZCCHC18P0CG32 403 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CALML3P27482 149 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PGM1P36871 562 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PRKCIP41743 596 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 NLRP6P59044 892 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ARSHQ5FYA8 562 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FAM83BQ5T0W9 1011 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 NIPAL1Q6NVV3 410 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 NET1Q7Z628 596 aaPredicted RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 ARHGAP24Q8N264 748 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 DNAJC1Q96KC8 554 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD9-218ENST00000566029 NYXQ9GZU5 481 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 EPS15L1Q9UBC2 864 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PHTF1Q9UMS5 762 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 C10orf71Q711Q0 1435 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 AREL1O15033 823 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TIMM44O43615 452 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 STK4Q13043 487 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZNF423Q2M1K9 1284 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CNNM4Q6P4Q7 775 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZNF571Q7Z3V5 609 aaPredicted RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 VPS37AQ8NEZ2 397 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 GDAP1Q8TB36 358 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 AGBL1Q96MI9 1066 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 C8orf37Q96NL8 207 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CCDC61Q9Y6R9 512 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ANKRD26Q9UPS8 1709 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ROBO2Q9HCK4 1378 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SPATA31A1Q5TZJ5 1347 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SLIT1O75093 1534 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ADAMTS3O15072 1205 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CCNT2O60583 730 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms