RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SEM1Q6ZVN7 128 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 FAM83AQ86UY5 434 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 MB21D1Q8N884 522 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 RNF169Q8NCN4 708 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 TFAP2CQ92754 450 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 TNPO1Q92973 898 aaKnown RBP5.58□□□□□ -1.52
CHD9-215ENST00000565442 CPEB1Q9BZB8 566 aaKnown RBP5.58□□□□□ -1.52
CHD9-215ENST00000565442 WDCPQ9H6R7 721 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 ATP6V0A4Q9HBG4 840 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 SPON1Q9HCB6 807 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 COL4A3Q01955 1670 aa5.58□□□□□ -1.52
CHD9-215ENST00000565442 A0A1W2PPL8 197 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 PJA2O43164 708 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 PQBP1O60828 265 aaKnown RBP5.57□□□□□ -1.52
CHD9-215ENST00000565442 MYL3P08590 195 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 FTH1P19P0C7X4 201 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 KITP10721 976 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 PHKG2P15735 406 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 RHBDL3P58872 404 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 HDAC1Q13547 482 aaPredicted RBP5.57□□□□□ -1.52
CHD9-215ENST00000565442 KHDC1LQ5JSQ8 128 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 MFSD5Q6N075 450 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 APOA5Q6Q788 366 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 DOK3Q7L591 496 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 FAM90A1Q86YD7 464 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 BEND2Q8NDZ0 799 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 BRIX1Q8TDN6 353 aaKnown RBP5.57□□□□□ -1.52
CHD9-215ENST00000565442 PARD3BQ8TEW8 1205 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 LRTOMTQ8WZ04 291 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 NDC1Q9BTX1 674 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 C22orf23Q9BZE7 217 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 MRPL46Q9H2W6 279 aaKnown RBP5.57□□□□□ -1.52
CHD9-215ENST00000565442 GSTO2Q9H4Y5 243 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 SARS2Q9NP81 518 aaKnown RBP5.57□□□□□ -1.52
CHD9-215ENST00000565442 FBXO34Q9NWN3 711 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 COX11Q9Y6N1 276 aa5.57□□□□□ -1.52
CHD9-215ENST00000565442 ANO9A1A5B4 782 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 PRR5-ARHGAP8B1AHC4 643 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 PHGDHO43175 533 aaKnown RBP5.56□□□□□ -1.52
CHD9-215ENST00000565442 MGEA5O60502 916 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 MFAP3LO75121 409 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 POMCP01189 267 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 MTHFD1P11586 935 aaKnown RBP5.56□□□□□ -1.52
CHD9-215ENST00000565442 HK1P19367 917 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 SLC6A4P31645 630 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 PIK3CGP48736 1102 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 CLK3P49761 638 aaKnown RBP5.56□□□□□ -1.52
CHD9-215ENST00000565442 UBXN2BQ14CS0 331 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 CCDC93Q567U6 631 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 EPHA10Q5JZY3 1008 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 ATXN7L2Q5T6C5 722 aaPredicted RBP5.56□□□□□ -1.52
CHD9-215ENST00000565442 EFCAB12Q6NXP0 572 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 RD3Q7Z3Z2 195 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 APBB1IPQ7Z5R6 666 aaPredicted RBP5.56□□□□□ -1.52
CHD9-215ENST00000565442 IL17RDQ8NFM7 739 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 ZFP28Q8NHY6 868 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 ST8SIA2Q92186 375 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 PHACTR3Q96KR7 559 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 NAA15Q9BXJ9 866 aaKnown RBP5.56□□□□□ -1.52
CHD9-215ENST00000565442 PACSIN1Q9BY11 444 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 CNNM1Q9NRU3 951 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 POGKQ9P215 609 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 TPCN1Q9ULQ1 816 aa5.56□□□□□ -1.52
CHD9-215ENST00000565442 USP19O94966 1318 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 IPO13O94829 963 aaKnown RBP5.55□□□□□ -1.52
CHD9-215ENST00000565442 GNAI3P08754 354 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 SLC5A1P13866 664 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 NPR1P16066 1061 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 HDCP19113 662 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 SLC6A2P23975 617 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 GNAI1P63096 354 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 EXOSC9Q06265 439 aaKnown RBP5.55□□□□□ -1.52
CHD9-215ENST00000565442 NAIF1Q69YI7 327 aaPredicted RBP5.55□□□□□ -1.52
CHD9-215ENST00000565442 GPRIN1Q7Z2K8 1008 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 MDGA1Q8NFP4 955 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 IL31RAQ8NI17 732 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 MPHOSPH6Q99547 160 aaKnown RBP5.55□□□□□ -1.52
CHD9-215ENST00000565442 BRD9Q9H8M2 597 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 CYP4F11Q9HBI6 524 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 GNL3LQ9NVN8 582 aaKnown RBP5.55□□□□□ -1.52
CHD9-215ENST00000565442 SIDT1Q9NXL6 827 aaKnown RBP5.55□□□□□ -1.52
CHD9-215ENST00000565442 SLC45A2Q9UMX9 530 aa5.55□□□□□ -1.52
CHD9-215ENST00000565442 CDHR4A6H8M9 788 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 PRSS29PA6NIE9 313 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 SLC43A1O75387 559 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 HAUS5O94927 633 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 MATN4O95460 622 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 GJB1P08034 283 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 IFIT2P09913 472 aaKnown RBP5.54□□□□□ -1.52
CHD9-215ENST00000565442 ALAS1P13196 640 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 MYF5P13349 255 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 SLC7A1P30825 629 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 SOX8P57073 446 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 PSMC1P62191 440 aaKnown RBP5.54□□□□□ -1.52
CHD9-215ENST00000565442 NOMO3P69849 1222 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 POLD3Q15054 466 aaPredicted RBP5.54□□□□□ -1.52
CHD9-215ENST00000565442 BRD3Q15059 726 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 TIGD2Q4W5G0 525 aa5.54□□□□□ -1.52
CHD9-215ENST00000565442 PCSK9Q8NBP7 692 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms