RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 MAPK6Q16659 721 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 AXDND1Q5T1B0 1012 aaPredicted RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 EEF1DP3Q658K8 133 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 SLC27A1Q6PCB7 646 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 SHC4Q6S5L8 630 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 MRPL10Q7Z7H8 261 aaKnown RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 ZNF280BQ86YH2 543 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 THNSL1Q8IYQ7 743 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 MYCT1Q8N699 235 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 COLGALT1Q8NBJ5 622 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 SLC17A8Q8NDX2 589 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 LARP4BQ92615 738 aaKnown RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 RABGGTAQ92696 567 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 NXPE3Q969Y0 559 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 PGBD4Q96DM1 585 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 ZBTB45Q96K62 511 aaPredicted RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 DRC1Q96MC2 740 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 NFKBIZQ9BYH8 718 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 TRIM6Q9C030 488 aaPredicted RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 MRPL18Q9H0U6 180 aaKnown RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 C2orf40Q9H1Z8 148 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 CXCL16Q9H2A7 254 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 NXF3Q9H4D5 531 aaKnown RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 PDZD7Q9H5P4 517 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 PRMT7Q9NVM4 692 aaPredicted RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 MIOSQ9NXC5 875 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 SNTG2Q9NY99 539 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 TBC1D7Q9P0N9 293 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 PARP2Q9UGN5 583 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 PCDHA7Q9UN72 937 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 PLAGL2Q9UPG8 496 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 PCDHB12Q9Y5F1 795 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 XIRP2A4UGR9 3374 aa6.37□□□□□ -1.39
CDH13-206ENST00000562601 TCF20Q9UGU0 1960 aaKnown RBP6.37□□□□□ -1.39
CDH13-206ENST00000562601 CNTNAP2Q9UHC6 1331 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 A0A1B0GUA9 196 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 ARL5CA6NH57 179 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 C5orf67F2Z3F1 127 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 DLL1O00548 723 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 N4BP3O15049 544 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 SLC26A4O43511 780 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 CUTAO60888 179 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 ZNF623O75123 536 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 ZC3H11AO75152 810 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDH13-206ENST00000562601 PPP6R2O75170 966 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 DEAF1O75398 565 aaPredicted RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 DDHD2O94830 711 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 YEATS4O95619 227 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 PROCP04070 461 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 HARSP12081 509 aaKnown RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 EPHA1P21709 976 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 NMT1P30419 496 aaKnown RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 GTF2F1P35269 517 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDH13-206ENST00000562601 MLH1P40692 756 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 STAT6P42226 847 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 RAB27AP51159 221 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 SCNN1GP51170 649 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 EFNA5P52803 228 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 BCAR1P56945 870 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 OSTNP61366 133 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 RNASELQ05823 741 aaKnown RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 CAMK1Q14012 370 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 SETDB1Q15047 1291 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 FAM187BQ17R55 369 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 SEZ6Q53EL9 994 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 NAALADL2Q58DX5 795 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 TCEAL5Q5H9L2 206 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 NOMO2Q5JPE7 1267 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 ATF7IP2Q5U623 682 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 PEAR1Q5VY43 1037 aaPredicted RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 KCNT2Q6UVM3 1135 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 GLB1LQ6UWU2 654 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 CCDC73Q6ZRK6 1079 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 EP400NLQ6ZTU2 488 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 SV2BQ7L1I2 683 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 LRRC43Q8N309 656 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 TMEM161BQ8NDZ6 487 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 SPPL3Q8TCT6 385 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 POF1BQ8WVV4 589 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 DHX58Q96C10 678 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 MRPL38Q96DV4 380 aaKnown RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 SAMD11Q96NU1 681 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 GAD1Q99259 594 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 ACO2Q99798 780 aaKnown RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 C11orf84Q9BUA3 381 aaPredicted RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 TIPINQ9BVW5 301 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 TARS2Q9BW92 718 aaKnown RBP6.36□□□□□ -1.39
CDH13-206ENST00000562601 NRDE2Q9H7Z3 1164 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 RSAD1Q9HA92 442 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 OSGEPQ9NPF4 335 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 TBC1D13Q9NVG8 400 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 CACNG4Q9UBN1 327 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 DNAJB4Q9UDY4 337 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 RCOR1Q9UKL0 485 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 CFAP45Q9UL16 551 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 SOX13Q9UN79 622 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 GDAQ9Y2T3 454 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 RWDD3Q9Y3V2 267 aa6.36□□□□□ -1.39
CDH13-206ENST00000562601 CITO14578 2027 aa6.35□□□□□ -1.39
CDH13-206ENST00000562601 PHLPP2Q6ZVD8 1323 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms