RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 MAIP1Q8WWC4 291 aa10.43□□□□□ -0.74
SMG1-205ENST00000561947 MAML3Q96JK9 1138 aa10.43□□□□□ -0.74
SMG1-205ENST00000561947 PPP1R16BQ96T49 567 aa10.43□□□□□ -0.74
SMG1-205ENST00000561947 TXLNGYQ9BZA5 131 aa10.43□□□□□ -0.74
SMG1-205ENST00000561947 GBA2Q9HCG7 927 aaPredicted RBP10.43□□□□□ -0.74
SMG1-205ENST00000561947 PCDHGC3Q9UN70 934 aa10.43□□□□□ -0.74
SMG1-205ENST00000561947 POLIQ9UNA4 740 aa10.43□□□□□ -0.74
SMG1-205ENST00000561947 NFS1Q9Y697 457 aa10.43□□□□□ -0.74
SMG1-205ENST00000561947 ZNF236Q9UL36 1845 aa10.43□□□□□ -0.74
SMG1-205ENST00000561947 LACTBL1A8MY62 500 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 H3BRB1 525 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 SHOX2O60902 331 aaPredicted RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 PPFIA2O75334 1257 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 CSDE1O75534 798 aaKnown RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 ERLIN2O94905 339 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 VTNP04004 478 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 NFICP08651 508 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 CDH5P33151 784 aaPredicted RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 RPL21P46778 160 aaKnown RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 ZNF394Q53GI3 561 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 SPDYCQ5MJ68 293 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 CEP85LQ5SZL2 805 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 RHOT1Q8IXI2 618 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 CCDC105Q8IYK2 499 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 TMEM35BQ8NCS4 154 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 UBLCP1Q8WVY7 318 aaPredicted RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 PARK7Q99497 189 aaKnown RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 ZNF518BQ9C0D4 1074 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 TUT1Q9H6E5 874 aaKnown RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 GRHL1Q9NZI5 618 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 SIX4Q9UIU6 781 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 MEFVO15553 781 aaPredicted RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 RPS6KA5O75582 802 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 KRT19P08727 400 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 HOXD8P13378 290 aaPredicted RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 SMPD1P17405 629 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 KYAT1Q16773 422 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 DUSP28Q4G0W2 176 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 SGO2Q562F6 1265 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 ZNF667Q5HYK9 610 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 DAB2IPQ5VWQ8 1189 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 JADE1Q6IE81 842 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 TFAP2BQ92481 460 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 SLCO2A1Q92959 643 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 CPB2Q96IY4 423 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 BCO2Q9BYV7 579 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 TMBIM4Q9HC24 238 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 NXF1Q9UBU9 619 aaKnown RBP10.42□□□□□ -0.74
SMG1-205ENST00000561947 PARP2Q9UGN5 583 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 IP6K2Q9UHH9 426 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 CITO14578 2027 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 PASKQ96RG2 1323 aa10.42□□□□□ -0.74
SMG1-205ENST00000561947 TCRBV5S1A1TA0A578 114 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 GOLGA6L10A6NI86 522 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 HMGB1P1B2RPK0 211 aaPredicted RBP10.41□□□□□ -0.74
SMG1-205ENST00000561947 GJB6O95452 261 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 MMP3P08254 477 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ARF4P18085 180 aaPredicted RBP10.41□□□□□ -0.74
SMG1-205ENST00000561947 PLTPP55058 493 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 TAS2R40P59535 323 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 SKOR1P84550 965 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 GRIK4Q16099 956 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 FAM110CQ1W6H9 321 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 SPRYD7Q5W111 196 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 KCTD16Q68DU8 428 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 PLEKHH3Q7Z736 793 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 KATNAL2Q8IYT4 538 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 SH2D3CQ8N5H7 860 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 OR6J1Q8NGC5 347 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 FAXDC2Q96IV6 333 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ATP6V1G3Q96LB4 118 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 CEP83Q9Y592 693 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 TMEM191CA6NGB0 347 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 O00370 1275 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ECEL1O95672 775 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 EIF4BP23588 611 aaKnown RBP10.41□□□□□ -0.74
SMG1-205ENST00000561947 RAP1GAPP47736 663 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 KCNJ1P48048 391 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ZNF844Q08AG5 666 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ACVR2BQ13705 512 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 LLGL1Q15334 1064 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ZSCAN26Q16670 478 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 DNAJC24Q6P3W2 148 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 WDTC1Q8N5D0 677 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 OR2W6PQ8NHA6 318 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 FBXO25Q8TCJ0 367 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 C1orf54Q8WWF1 131 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 NLRP7Q8WX94 980 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 HERPUD2Q9BSE4 406 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 TINF2Q9BSI4 451 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ABHD16BQ9H3Z7 469 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ASB7Q9H672 318 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 LCMT1Q9UIC8 334 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 USTQ9Y2C2 406 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 PTPN22Q9Y2R2 807 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 TSPAN1O60635 241 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ITGB3P05106 788 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 MYZAPP0CAP1 466 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 RPL7AP62424 266 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms