RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TMPRSS5Q9H3S3 457 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 WDCPQ9H6R7 721 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 NR2E3Q9Y5X4 410 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 HS3ST3A1Q9Y663 406 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 RPGRIP1LQ68CZ1 1315 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 MYBBP1AQ9BQG0 1328 aaKnown RBP4.61□□□□□ -1.67
HERC1-215ENST00000561436 LRPPRCP42704 1394 aaKnown RBP4.61□□□□□ -1.67
HERC1-215ENST00000561436 ROCK1Q13464 1354 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 DAPK1P53355 1430 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 ADAMTS13Q76LX8 1427 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 ANKRD50Q9ULJ7 1429 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 AHDC1Q5TGY3 1603 aaPredicted RBP4.61□□□□□ -1.67
HERC1-215ENST00000561436 MROH1Q8NDA8 1641 aa4.61□□□□□ -1.67
HERC1-215ENST00000561436 KDM5AP29375 1690 aaKnown RBP4.61□□□□□ -1.67
HERC1-215ENST00000561436 H3BUI4 141 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 PEX14O75381 377 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 ALDH2P05091 517 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 MYBP10242 640 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 TACR2P21452 398 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 ACRV1P26436 265 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 RHBDL3P58872 404 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 APBA1Q02410 837 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 DSC2Q02487 901 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 HHEXQ03014 270 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 LLGL1Q15334 1064 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 KHDC1Q4VXA5 237 aaKnown RBP4.6□□□□□ -1.67
HERC1-215ENST00000561436 C1QL3Q5VWW1 255 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 NPNTQ6UXI9 565 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 Q6ZVL8 140 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 HEATR3Q7Z4Q2 680 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 TRMT2AQ8IZ69 625 aaKnown RBP4.6□□□□□ -1.67
HERC1-215ENST00000561436 AOPEPQ8N6M6 819 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 MDM1Q8TC05 714 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 PLEKHG4BQ96PX9 1271 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 LDAHQ9H6V9 325 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 SARS2Q9NP81 518 aaKnown RBP4.6□□□□□ -1.67
HERC1-215ENST00000561436 DDX21Q9NR30 783 aaKnown RBP eCLIP4.6□□□□□ -1.67
HERC1-215ENST00000561436 ING1Q9UK53 422 aaPredicted RBP4.6□□□□□ -1.67
HERC1-215ENST00000561436 AJAP1Q9UKB5 411 aaPredicted RBP4.6□□□□□ -1.67
HERC1-215ENST00000561436 HDAC5Q9UQL6 1122 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 FAM50BQ9Y247 325 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 TESMINQ9Y4I5 508 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 PCDHB1Q9Y5F3 818 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 COMMD10Q9Y6G5 202 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 PNPLA6Q8IY17 1366 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 ADGRL2O95490 1459 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 LRP6O75581 1613 aa4.6□□□□□ -1.67
HERC1-215ENST00000561436 A0A1W2PPL8 197 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 CFAP69A5D8W1 941 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 B5MCH6 92 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 ADGRB3O60242 1522 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 RAP2AP10114 183 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 MTHFD1P11586 935 aaKnown RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 SLC6A9P48067 706 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 FLT3LGP49771 235 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 AGFG1P52594 562 aaKnown RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 USP14P54578 494 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 CTXN1P60606 82 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 SLC25A3Q00325 362 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 TARDBPQ13148 414 aaKnown RBP eCLIP4.59□□□□□ -1.67
HERC1-215ENST00000561436 FOXE3Q13461 319 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 DIP2AQ14689 1571 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 POLD3Q15054 466 aaPredicted RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 PRAMEF14Q5SWL7 426 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 RNF220Q5VTB9 566 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 ANKS6Q68DC2 871 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 MFSD5Q6N075 450 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 CRIP3Q6Q6R5 217 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 ZNF572Q7Z3I7 529 aaPredicted RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 NPHP3Q7Z494 1330 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 PRAG1Q86YV5 1406 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 KIAA0319LQ8IZA0 1049 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 LILRA3Q8N6C8 439 aaPredicted RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 SLC16A11Q8NCK7 471 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 FAM156AQ8NDB6 213 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 REPS2Q8NFH8 660 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 SVIPQ8NHG7 77 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 BRIX1Q8TDN6 353 aaKnown RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 ATXN2LQ8WWM7 1075 aaKnown RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 LRTOMTQ8WZ04 291 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 SLC35A4Q96G79 324 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 TNIP3Q96KP6 325 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 MPHOSPH6Q99547 160 aaKnown RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 GPR87Q9BY21 358 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 CPEB1Q9BZB8 566 aaKnown RBP4.59□□□□□ -1.67
HERC1-215ENST00000561436 SLC2A4RGQ9NR83 387 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 PNPOQ9NVS9 261 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 ABCF2Q9UG63 623 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 CLCA2Q9UQC9 943 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 SIK3Q9Y2K2 1263 aa4.59□□□□□ -1.67
HERC1-215ENST00000561436 POLR1AO95602 1720 aaPredicted RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 RGS12O14924 1447 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 MST1RQ04912 1400 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 A0A088AWK7 358 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 FOXN3O00409 490 aaPredicted RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 PHGDHO43175 533 aaKnown RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 AKAP8O43823 692 aaKnown RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 PQBP1O60828 265 aaKnown RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 RPS6KA4O75676 772 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 GNAI3P08754 354 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms