RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 FLCNQ8NFG4 579 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 ZNF461Q8TAF7 563 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 SLC7A14Q8TBB6 771 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 RSAD2Q8WXG1 361 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 ATOH1Q92858 354 aaPredicted RBP16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 SLC2A4RGQ9NR83 387 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 FBXL5Q9UKA1 691 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 CDH7Q9ULB5 785 aa16.42■□□□□ 0.22
SNRPA1-210ENST00000560383 NOTCH4Q99466 2003 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 H0Y858 1186 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 SPTLC1O15269 473 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 PSMD2Q13200 908 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 ZNF280DQ6N043 979 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 C12orf56Q8IXR9 622 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 FSIP1Q8NA03 581 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 OXCT2Q9BYC2 517 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 PCIF1Q9H4Z3 704 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 GDPD2Q9HCC8 539 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 KIAA1586Q9HCI6 787 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 SLC39A2Q9NP94 309 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 AGPAT3Q9NRZ7 376 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 DPP3Q9NY33 737 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 RBAKQ9NYW8 714 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 CGNQ9P2M7 1197 aaKnown RBP16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 MAFFQ9ULX9 164 aa16.41■□□□□ 0.22
SNRPA1-210ENST00000560383 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 WDR27A2RRH5 827 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 GOLGA8IPA6NC78 632 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 GOLGA8JA6NMD2 632 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 ATF2P15336 505 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 YWHAHQ04917 246 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 STK4Q13043 487 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 KMT5BQ4FZB7 885 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 CTXN3Q4LDR2 81 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 TPGS2Q68CL5 300 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 KRBA2Q6ZNG9 492 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 MTSS1LQ765P7 747 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 CXorf38Q8TB03 319 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 TMEM174Q8WUU8 243 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 FGF13Q92913 245 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 BORCS6Q96GS4 357 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 SENP8Q96LD8 212 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 FAM86C1Q9NVL1 165 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 HSPBP1Q9NZL4 362 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 NUMBLQ9Y6R0 609 aa16.4■□□□□ 0.22
SNRPA1-210ENST00000560383 ARHGEF37A1IGU5 675 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 KRBA1A5PL33 1030 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 ZNF233A6NK53 670 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 CCL16O15467 120 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 ABCB7O75027 752 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 CYP11A1P05108 521 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 CFHP08603 1231 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 NBL1P41271 181 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 SURF1Q15526 300 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 KNOP1Q1ED39 458 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 PHLDB3Q6NSJ2 640 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 DSTYKQ6XUX3 929 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 HS2ST1Q7LGA3 356 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 CBWD2Q8IUF1 395 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 TCEAL8Q8IYN2 117 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 KIAA0895Q8NCT3 520 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 CACTINQ8WUQ7 758 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 AVENQ9NQS1 362 aaPredicted RBP16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 EXOC1Q9NV70 894 aa16.39■□□□□ 0.21
SNRPA1-210ENST00000560383 ANK1P16157 1881 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 OR6C75A6NL08 312 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 GFRA3O60609 400 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 ZNF202O95125 648 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 ODC1P11926 461 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 TFAMQ00059 246 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 DPYDQ12882 1025 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 PABPC1LQ4VXU2 614 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 NELFCDQ8IXH7 590 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 C1orf127Q8N9H9 656 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 GPR152Q8TDT2 470 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 ARHGEF3Q9NR81 526 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 POLIQ9UNA4 740 aa16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 TIMM13Q9Y5L4 95 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 ZFHX2Q9C0A1 2572 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-210ENST00000560383 PI15O43692 258 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 RHOBTB3O94955 611 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 PNPLA4P41247 253 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 TAF6P49848 677 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 NTHL1P78549 312 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 SNRNP35Q16560 246 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 OVOS1Q6IE37 1185 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 USP37Q86T82 979 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 NPAS3Q8IXF0 933 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 LRRC52Q8N7C0 313 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 DTWD2Q8NBA8 298 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 XXYLT1Q8NBI6 393 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 GOLGA5Q8TBA6 731 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 FGF14Q92915 247 aa16.37■□□□□ 0.21
SNRPA1-210ENST00000560383 TBC1D17Q9HA65 648 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms