RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PTPRJQ12913 1337 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 PDXKO00764 312 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 CLIC2O15247 247 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 XYLBO75191 536 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 RPN1P04843 607 aaKnown RBP14.26□□□□□ -0.13
SMAD3-213ENST00000560175 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 ODC1P11926 461 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 CLDN10P78369 228 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 TFAMQ00059 246 aaKnown RBP14.26□□□□□ -0.13
SMAD3-213ENST00000560175 PSMD6Q15008 389 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 SNRNP35Q16560 246 aaKnown RBP14.26□□□□□ -0.13
SMAD3-213ENST00000560175 RNF19BQ6ZMZ0 732 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 TRIM67Q6ZTA4 783 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 USP37Q86T82 979 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 WDR49Q8IV35 697 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 NELFCDQ8IXH7 590 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 ELOA2Q8IYF1 753 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-213ENST00000560175 SPATA20Q8TB22 786 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 GOLGA5Q8TBA6 731 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 SPATA18Q8TC71 538 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 NXPE3Q969Y0 559 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 MYADMQ96S97 322 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 PIDD1Q9HB75 910 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 EXOC1Q9NV70 894 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 IGSF9Q9P2J2 1179 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 DNMT3BQ9UBC3 853 aaKnown RBP14.26□□□□□ -0.13
SMAD3-213ENST00000560175 DSEQ9UL01 958 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 SORCS3Q9UPU3 1222 aa14.26□□□□□ -0.13
SMAD3-213ENST00000560175 ZNF318Q5VUA4 2279 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-213ENST00000560175 ANHXE9PGG2 379 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 CYB561D2O14569 222 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 ITGB3P05106 788 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 LAMP2P13473 410 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 SP100P23497 879 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-213ENST00000560175 RBP5P82980 135 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 CYP24A1Q07973 514 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 ADCY1Q08828 1119 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 SIGLEC14Q08ET2 396 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 NFIL3Q16649 462 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 DUOXA2Q1HG44 320 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 SV2CQ496J9 727 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 DPH6Q7L8W6 267 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 GRASPQ7Z6J2 395 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-213ENST00000560175 UBALD2Q8IYN6 164 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 OR5B17Q8NGF7 314 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 ASIC4Q96FT7 647 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 TIGD1Q96MW7 591 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 KCNK12Q9HB15 430 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 AGAP1Q9UPQ3 857 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 TRAF3IP3Q9Y228 551 aa14.25□□□□□ -0.13
SMAD3-213ENST00000560175 CCL16O15467 120 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 PRPF40AO75400 957 aaKnown RBP14.24□□□□□ -0.13
SMAD3-213ENST00000560175 MICAL2O94851 1124 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 POLR2BP30876 1174 aaKnown RBP14.24□□□□□ -0.13
SMAD3-213ENST00000560175 ELF1P32519 619 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 EPHA5P54756 1037 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 WSCD1Q658N2 575 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 CENPPQ6IPU0 288 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 GUF1Q8N442 669 aaKnown RBP14.24□□□□□ -0.13
SMAD3-213ENST00000560175 CSGALNACT2Q8N6G5 542 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 OR10T2Q8NGX3 314 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 ZNF516Q92618 1163 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 ANKRD36BP1Q96IX9 119 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 MTMR12Q9C0I1 747 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 ZCWPW1Q9H0M4 648 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 CRISPLD1Q9H336 500 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 CYP4F11Q9HBI6 524 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 INSL5Q9Y5Q6 135 aa14.24□□□□□ -0.13
SMAD3-213ENST00000560175 FAM86C2PA6NEL3 165 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 GABRDO14764 452 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 MAPK13O15264 365 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 CST3P01034 146 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-213ENST00000560175 ASGR2P07307 311 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 FAM163BP0C2L3 166 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 PTPN2P17706 415 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 FSHRP23945 695 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 ARPP19P56211 112 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 NTHL1P78549 312 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 FAM160A1Q05DH4 1040 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 SMARCB1Q12824 385 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 COBLL1Q53SF7 1204 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 PRSS36Q5K4E3 855 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 POTEHQ6S545 545 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 TRAPPC11Q7Z392 1133 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 LRRTM3Q86VH5 581 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 TMEM86AQ8N2M4 240 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 RDH13Q8NBN7 331 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 PLEKHO2Q8TD55 490 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 FAM84AQ96KN4 292 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 TMEM209Q96SK2 561 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 CGRRF1Q99675 332 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 LRRC3Q9BY71 257 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 HCFC1R1Q9NWW0 138 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 CEP72Q9P209 647 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 CDH7Q9ULB5 785 aa14.23□□□□□ -0.13
SMAD3-213ENST00000560175 ARIH1Q9Y4X5 557 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms