RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 CYB561D2O14569 222 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 AARSP49588 968 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNX1-209ENST00000559961 GRIN1Q05586 938 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 SLC5A9Q2M3M2 681 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 FAM78AQ5JUQ0 283 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 C1orf228Q6PIY5 440 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 ASCL5Q7RTU5 278 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 DENND4AQ7Z401 1863 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 CCDC65Q8IXS2 484 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 C2orf15Q8WU43 125 aaKnown RBP13.6□□□□□ -0.23
SNX1-209ENST00000559961 ATRIPQ8WXE1 791 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 SECISBP2LQ93073 1101 aaKnown RBP13.6□□□□□ -0.23
SNX1-209ENST00000559961 TCEAL4Q96EI5 215 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 PYM1Q9BRP8 204 aaKnown RBP13.6□□□□□ -0.23
SNX1-209ENST00000559961 PANK2Q9BZ23 570 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 HAPLN2Q9GZV7 340 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 TMEM206Q9H813 350 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 HSFX1Q9UBD0 423 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 FBXO2Q9UK22 296 aaPredicted RBP13.6□□□□□ -0.23
SNX1-209ENST00000559961 YIPF1Q9Y548 306 aa13.6□□□□□ -0.23
SNX1-209ENST00000559961 ANKRD63C9JTQ0 380 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 STX6O43752 255 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 KINO60870 393 aaKnown RBP13.59□□□□□ -0.23
SNX1-209ENST00000559961 ADRB2P07550 413 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 NFICP08651 508 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 OR4Q2P0C623 313 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 GDI1P31150 447 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 GUCY2FP51841 1108 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 TFAMQ00059 246 aaKnown RBP13.59□□□□□ -0.23
SNX1-209ENST00000559961 TSPY1Q01534 308 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 GRM2Q14416 872 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 SLC39A14Q15043 492 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 MGAT5BQ3V5L5 792 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 SLC39A12Q504Y0 691 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 PRSS36Q5K4E3 855 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
SNX1-209ENST00000559961 HS6ST3Q8IZP7 471 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 ZSCAN18Q8TBC5 510 aaPredicted RBP13.59□□□□□ -0.23
SNX1-209ENST00000559961 ASB16Q96NS5 453 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 CLIC6Q96NY7 704 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 SEPT5Q99719 369 aaPredicted RBP13.59□□□□□ -0.23
SNX1-209ENST00000559961 ATXN3LQ9H3M9 355 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 LTB4R2Q9NPC1 389 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 PANK4Q9NVE7 773 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 TBC1D7Q9P0N9 293 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 CEP72Q9P209 647 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 FBXO4Q9UKT5 387 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 SLC27A5Q9Y2P5 690 aa13.59□□□□□ -0.23
SNX1-209ENST00000559961 TRIOO75962 3097 aa13.58□□□□□ -0.23
SNX1-209ENST00000559961 C2orf16Q68DN1 1984 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
SNX1-209ENST00000559961 PIRO00625 290 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 KIAA0391O15091 583 aaKnown RBP13.58□□□□□ -0.24
SNX1-209ENST00000559961 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
SNX1-209ENST00000559961 HUS1O60921 280 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 SP9P0CG40 484 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 GLULP15104 373 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 KPNA1P52294 538 aaPredicted RBP13.58□□□□□ -0.24
SNX1-209ENST00000559961 CSTF1Q05048 431 aaKnown RBP13.58□□□□□ -0.24
SNX1-209ENST00000559961 RESTQ13127 1097 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 PTPAQ15257 358 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 TEAD2Q15562 447 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 ZNF528Q3MIS6 628 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 CENPPQ6IPU0 288 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 MFSD6LQ8IWD5 586 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 FAM213AQ9BRX8 229 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 DDX23Q9BUQ8 820 aaKnown RBP13.58□□□□□ -0.24
SNX1-209ENST00000559961 HEBP1Q9NRV9 189 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 THG1LQ9NWX6 298 aaKnown RBP13.58□□□□□ -0.24
SNX1-209ENST00000559961 ZMYM5Q9UJ78 669 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 STYXL1Q9Y6J8 313 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 KMT2EQ8IZD2 1858 aa13.58□□□□□ -0.24
SNX1-209ENST00000559961 MTCL1Q9Y4B5 1905 aaKnown RBP13.58□□□□□ -0.24
SNX1-209ENST00000559961 A0A1W2PRU2 124 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 MTMR11A4FU01 709 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 MYMKA6NI61 221 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 FAM189A1O60320 539 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 CYP11A1P05108 521 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 CD72P21854 359 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 GARTP22102 1010 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 CDC25CP30307 473 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 RPS9P46781 194 aaKnown RBP13.57□□□□□ -0.24
SNX1-209ENST00000559961 EPHA5P54756 1037 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 NRLP54845 237 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 SURF1Q15526 300 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 SLC39A4Q6P5W5 647 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 USP49Q70CQ1 688 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 DNAJB7Q7Z6W7 309 aaPredicted RBP13.57□□□□□ -0.24
SNX1-209ENST00000559961 ATAD1Q8NBU5 361 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 FAM3CQ92520 227 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 PSMG2Q969U7 264 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 MSANTD3Q96H12 275 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 IER2Q9BTL4 223 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 PLA2G2FQ9BZM2 168 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 CUEDC2Q9H467 287 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 TRPV4Q9HBA0 871 aa13.57□□□□□ -0.24
SNX1-209ENST00000559961 ZNF334Q9HCZ1 680 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms