RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 RC3H2Q9HBD1 1191 aaKnown RBP11.17□□□□□ -0.62
TPM1-221ENST00000559831 ZNHIT6Q9NWK9 470 aaKnown RBP11.17□□□□□ -0.62
TPM1-221ENST00000559831 FAN1Q9Y2M0 1017 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 VWA8A3KMH1 1905 aa11.17□□□□□ -0.62
TPM1-221ENST00000559831 MYH10P35580 1976 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 H0YGN5 161 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 NRP1O14786 923 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 HUS1O60921 280 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 TADA2AO75478 443 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 ALDH2P05091 517 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 GALTP07902 379 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 SKILP12757 684 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 FERP16591 822 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 BCAR1P56945 870 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 SHHQ15465 462 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 TIGD5Q53EQ6 642 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 E4F1Q66K89 784 aaPredicted RBP11.16□□□□□ -0.62
TPM1-221ENST00000559831 TMEM270Q6UE05 265 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 CD300LGQ6UXG3 332 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 APPL2Q8NEU8 664 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 SHC3Q92529 594 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 ZNF830Q96NB3 372 aaPredicted RBP11.16□□□□□ -0.62
TPM1-221ENST00000559831 PANX2Q96RD6 677 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 DNAJC7Q99615 494 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 MRPL45Q9BRJ2 306 aaKnown RBP11.16□□□□□ -0.62
TPM1-221ENST00000559831 UBE2OQ9C0C9 1292 aaKnown RBP11.16□□□□□ -0.62
TPM1-221ENST00000559831 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
TPM1-221ENST00000559831 CWH43Q9H720 699 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 CYP3A43Q9HB55 503 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 CISHQ9NSE2 258 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 GDAP2Q9NXN4 497 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 MYO6Q9UM54 1294 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
TPM1-221ENST00000559831 MRPL42Q9Y6G3 142 aaKnown RBP11.16□□□□□ -0.62
TPM1-221ENST00000559831 MKI67P46013 3256 aaKnown RBP11.15□□□□□ -0.62
TPM1-221ENST00000559831 CYP26A1O43174 497 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 TLL1O43897 1013 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 CALCAP01258 141 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 ODC1P11926 461 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 ACO1P21399 889 aaKnown RBP11.15□□□□□ -0.62
TPM1-221ENST00000559831 ALDH7A1P49419 539 aaKnown RBP11.15□□□□□ -0.62
TPM1-221ENST00000559831 ORC1Q13415 861 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 SOWAHAQ2M3V2 549 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 ZNF394Q53GI3 561 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 TDRD12Q587J7 1177 aaKnown RBP11.15□□□□□ -0.62
TPM1-221ENST00000559831 WSCD1Q658N2 575 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 LRRC8AQ8IWT6 810 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 PDCL2Q8N4E4 241 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 FIBCD1Q8N539 461 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 TOP6BLQ8N6T0 577 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 UBR7Q8N806 425 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 RBBP8NLQ8NC74 664 aaPredicted RBP11.15□□□□□ -0.62
TPM1-221ENST00000559831 OR6B3Q8NGW1 331 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 PHOSPHO2Q8TCD6 241 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 FAXDC2Q96IV6 333 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 ZNF558Q96NG5 402 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 BAG1Q99933 345 aaPredicted RBP11.15□□□□□ -0.62
TPM1-221ENST00000559831 SNX25Q9H3E2 840 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 MARCH5Q9NX47 278 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
TPM1-221ENST00000559831 ADAM28Q9UKQ2 775 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 INSL6Q9Y581 213 aa11.15□□□□□ -0.62
TPM1-221ENST00000559831 TIMM13Q9Y5L4 95 aaPredicted RBP11.15□□□□□ -0.62
TPM1-221ENST00000559831 A8MXQ7 604 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 TRAPPC3O43617 180 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 NRDCO43847 1150 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 SERPING1P05155 500 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 CCDC172P0C7W6 258 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 LAG3P18627 525 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 PAX3P23760 479 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 CLCN1P35523 988 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 AARSP49588 968 aaKnown RBP eCLIP11.14□□□□□ -0.63
TPM1-221ENST00000559831 NDST1P52848 882 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 RABGGTBP53611 331 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 HTRA4P83105 476 aaPredicted RBP11.14□□□□□ -0.63
TPM1-221ENST00000559831 KLHL30Q0D2K2 578 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 RASIP1Q5U651 963 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 WDR59Q6PJI9 974 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 KCNT2Q6UVM3 1135 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 OSTM1Q86WC4 334 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 METTL23Q86XA0 190 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 FMNL3Q8IVF7 1028 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 FAM71AQ8IYT1 594 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 COLGALT1Q8NBJ5 622 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 CCDC112Q8NEF3 446 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 SYN2Q92777 582 aaPredicted RBP11.14□□□□□ -0.63
TPM1-221ENST00000559831 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 SUSD3Q96L08 255 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 RAD9AQ99638 391 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 AIPL1Q9NZN9 384 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 HMGXB4Q9UGU5 601 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 BARX2Q9UMQ3 279 aaPredicted RBP11.14□□□□□ -0.63
TPM1-221ENST00000559831 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 PLXNA4Q9HCM2 1894 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 CEP290O15078 2479 aa11.14□□□□□ -0.63
TPM1-221ENST00000559831 ARHGEF37A1IGU5 675 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 LCHNA4D1U4 455 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms