RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 FAM170BA6NMN3 283 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 PIRO00625 290 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 MAN2B1O00754 1011 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 LDHAP00338 332 aaKnown RBP13.27□□□□□ -0.29
SPG11-219ENST00000559822 LMNAP02545 664 aaKnown RBP13.27□□□□□ -0.29
SPG11-219ENST00000559822 CYP11A1P05108 521 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 OR4Q2P0C623 313 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 PSMC3P17980 439 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 FCARP24071 287 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 CCR2P41597 374 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 STAT6P42226 847 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 TAF6P49848 677 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 CEBPZQ03701 1054 aaKnown RBP13.27□□□□□ -0.29
SPG11-219ENST00000559822 DUSP4Q13115 394 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 CENPPQ6IPU0 288 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 USP49Q70CQ1 688 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 ITIH5Q86UX2 942 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 THEM5Q8N1Q8 247 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 KCNG4Q8TDN1 519 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 ZNF560Q96MR9 790 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 CLIC6Q96NY7 704 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 PLA2G2FQ9BZM2 168 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 LRRC27Q9C0I9 530 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 TRPV4Q9HBA0 871 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 OLFML3Q9NRN5 406 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.29
SPG11-219ENST00000559822 DPP3Q9NY33 737 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 PTPRZ1P23471 2315 aaPredicted RBP13.27□□□□□ -0.29
SPG11-219ENST00000559822 FAM186AA6NE01 2351 aa13.27□□□□□ -0.29
SPG11-219ENST00000559822 RIF1Q5UIP0 2472 aaKnown RBP13.27□□□□□ -0.29
SPG11-219ENST00000559822 USP34Q70CQ2 3546 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 MTMR11A4FU01 709 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 MYMKA6NI61 221 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 K7ELQ4 463 aaPredicted RBP13.26□□□□□ -0.29
SPG11-219ENST00000559822 PPEF2O14830 753 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 LAMTOR5O43504 91 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 PPP1R37O75864 691 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 GCNT3O95395 438 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 SP9P0CG40 484 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 IDEP14735 1019 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 PNPLA4P41247 253 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 RPS9P46781 194 aaKnown RBP13.26□□□□□ -0.29
SPG11-219ENST00000559822 TUFMP49411 452 aaKnown RBP13.26□□□□□ -0.29
SPG11-219ENST00000559822 SMARCB1Q12824 385 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 VEPH1Q14D04 833 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 SLC39A14Q15043 492 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 ZNF528Q3MIS6 628 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 SV2CQ496J9 727 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 ARHGAP15Q53QZ3 475 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 L1TD1Q5T7N2 865 aaKnown RBP13.26□□□□□ -0.29
SPG11-219ENST00000559822 STXBP4Q6ZWJ1 553 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 ADSSL1Q8N142 457 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 ZSCAN18Q8TBC5 510 aaPredicted RBP13.26□□□□□ -0.29
SPG11-219ENST00000559822 C2orf15Q8WU43 125 aaKnown RBP13.26□□□□□ -0.29
SPG11-219ENST00000559822 TRPV5Q9NQA5 729 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 HEBP1Q9NRV9 189 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 FBXO4Q9UKT5 387 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 MTMR6Q9Y217 621 aa13.26□□□□□ -0.29
SPG11-219ENST00000559822 TISP43B9A030 160 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 CYB561D2O14569 222 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 ZNF263O14978 683 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 SPTLC1O15269 473 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 STX6O43752 255 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 MOSPD3O75425 235 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 VNN2O95498 520 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 GLULP15104 373 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 GARTP22102 1010 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 GDI1P31150 447 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 GRM2Q14416 872 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 STK38Q15208 465 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 TEAD2Q15562 447 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 FAM173BQ6P4H8 233 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 C1orf228Q6PIY5 440 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 VITQ6UXI7 678 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 MFSD6LQ8IWD5 586 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 YAF2Q8IY57 180 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 SYCP3Q8IZU3 236 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 ATAD1Q8NBU5 361 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 SHKBP1Q8TBC3 707 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 CACTINQ8WUQ7 758 aaKnown RBP13.25□□□□□ -0.29
SPG11-219ENST00000559822 PSMG2Q969U7 264 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 CLDN23Q96B33 292 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 DNAJC19Q96DA6 116 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 MSANTD3Q96H12 275 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 GCNAQ96QF7 691 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 USP28Q96RU2 1077 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 PYM1Q9BRP8 204 aaKnown RBP13.25□□□□□ -0.29
SPG11-219ENST00000559822 IER2Q9BTL4 223 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 STRA6Q9BX79 667 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 TMEM206Q9H813 350 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 ZNF334Q9HCZ1 680 aaPredicted RBP13.25□□□□□ -0.29
SPG11-219ENST00000559822 R4GN57 208 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 ANK1P16157 1881 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 TSC2P49815 1807 aa13.25□□□□□ -0.29
SPG11-219ENST00000559822 A0A1W2PRU2 124 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 FRMD3A2A2Y4 597 aa13.24□□□□□ -0.29
SPG11-219ENST00000559822 KIAA0391O15091 583 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms