RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	SYCE2	Q6PIF2	218 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	TRAPPC11	Q7Z392	1133 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	KRT222	Q8N1A0	295 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	GUF1	Q8N442	669 aa	Known RBP	10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	BEST2	Q8NFU1	509 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	OR10T2	Q8NGX3	314 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	PARD3B	Q8TEW8	1205 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	KCNN1	Q92952	543 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	FBXL18	Q96ME1	805 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	FNBP1	Q96RU3	617 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	INTS13	Q9NVM9	706 aa		10.9	□□□□□ -0.66
FAM227B-208	ENST00000559573	GRXCR2	A6NFK2	248 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	PDXK	O00764	312 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	VNN1	O95497	513 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	CALCA	P01258	141 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	PDGFRB	P09619	1106 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	CLCN4	P51793	760 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	DSG1	Q02413	1049 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	ADAM15	Q13444	863 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	BIRC3	Q13489	604 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	CTC1	Q2NKJ3	1217 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	SDHAF4	Q5VUM1	108 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	KIF18A	Q8NI77	898 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	BORCS6	Q96GS4	357 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	PLEKHA5	Q9HAU0	1116 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	MAN1C1	Q9NR34	630 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	SLC38A7	Q9NVC3	462 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	HCFC1R1	Q9NWW0	138 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	FAM53C	Q9NYF3	392 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	ANO9	A1A5B4	782 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	WDR27	A2RRH5	827 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	CYB561D2	O14569	222 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	MYL1	P05976	194 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	PSMC1	P62191	440 aa	Known RBP	10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	LRMP	Q12912	555 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	CBWD6	Q4V339	395 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	CBWD3	Q5JTY5	395 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	CBWD5	Q5RIA9	395 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	RNF19B	Q6ZMZ0	732 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	LRRTM3	Q86VH5	581 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	FAM186B	Q8IYM0	893 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	ATAD1	Q8NBU5	361 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	CCDC47	Q96A33	483 aa	Known RBP	10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	MMS19	Q96T76	1030 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	RTP3	Q9BQQ7	232 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	ASB7	Q9H672	318 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	TMLHE	Q9NVH6	421 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	L1RE1	Q9UN81	338 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	TRAF3IP3	Q9Y228	551 aa		10.89	□□□□□ -0.67
FAM227B-208	ENST00000559573	GOLGA6L6	A8MZA4	724 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	KPNA7	A9QM74	516 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	SEC24A	O95486	1093 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	LDHA	P00338	332 aa	Known RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	CHRM1	P11229	460 aa	Predicted RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	FGFR3	P22607	806 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	KCNC3	Q14003	757 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	WDR72	Q3MJ13	1102 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	CTXN3	Q4LDR2	81 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	CCDC183	Q5T5S1	534 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	CENPP	Q6IPU0	288 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	OSTM1	Q86WC4	334 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	TAS1R2	Q8TE23	839 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	SEMA4D	Q92854	862 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	PABPC5	Q96DU9	382 aa	Known RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	MFSD14A	Q96MC6	490 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	SRRT	Q9BXP5	876 aa	Known RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	NGRN	Q9NPE2	291 aa	Known RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	FBXL5	Q9UKA1	691 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	PYCARD	Q9ULZ3	195 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	LZTS1	Q9Y250	596 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	DNAH14	Q0VDD8	3507 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	CCL16	O15467	120 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	CALU	O43852	315 aa	Predicted RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	PHACTR2	O75167	634 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	VNN2	O95498	520 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	LRPAP1	P30533	357 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	GPR15	P49685	360 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	ROR1	Q01973	937 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	UBE3A	Q05086	875 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	PSMD6	Q15008	389 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	DUOXA2	Q1HG44	320 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	TTI2	Q6NXR4	508 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	SV2A	Q7L0J3	742 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	HPDL	Q96IR7	371 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	MRPL45	Q9BRJ2	306 aa	Known RBP	10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	HERC2P3	Q9BVR0	1158 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	DNAJC25	Q9H1X3	360 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	SMOC2	Q9H3U7	446 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	DPEP3	Q9H4B8	488 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	SMYD3	Q9H7B4	428 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	RMND1	Q9NWS8	449 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	THEG	Q9P2T0	379 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	HMGXB4	Q9UGU5	601 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	FRMD4B	Q9Y2L6	1034 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	C2CD2	Q9Y426	696 aa		10.88	□□□□□ -0.67
FAM227B-208	ENST00000559573	NOTCH4	Q99466	2003 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms