RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
BMP4-204ENST00000558961 AGPAT3Q9NRZ7 376 aa12.14□□□□□ -0.47
BMP4-204ENST00000558961 DNMT3BQ9UBC3 853 aaKnown RBP12.14□□□□□ -0.47
BMP4-204ENST00000558961 HSFX1Q9UBD0 423 aa12.14□□□□□ -0.47
BMP4-204ENST00000558961 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
BMP4-204ENST00000558961 RAPGEFL1Q9UHV5 662 aa12.14□□□□□ -0.47
BMP4-204ENST00000558961 DSEQ9UL01 958 aa12.14□□□□□ -0.47
BMP4-204ENST00000558961 TIMM13Q9Y5L4 95 aaPredicted RBP12.14□□□□□ -0.47
BMP4-204ENST00000558961 A0A1B0GVL5 298 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 PRRG1O14668 218 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 LRG1P02750 347 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 CPB1P15086 417 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 ELF1P32519 619 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 PNPLA4P41247 253 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 AFMP43652 599 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 EPHA5P54756 1037 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 ZNF445P59923 1031 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 NTHL1P78549 312 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 ADCY1Q08828 1119 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 GPR17Q13304 367 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 SNW1Q13573 536 aaKnown RBP12.13□□□□□ -0.47
BMP4-204ENST00000558961 HTR4Q13639 388 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 SV2CQ496J9 727 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 PABPC1LQ4VXU2 614 aaKnown RBP12.13□□□□□ -0.47
BMP4-204ENST00000558961 RNF19BQ6ZMZ0 732 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 USP37Q86T82 979 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 FBXL6Q8N531 539 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 FGF13Q92913 245 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 PAGE5Q96GU1 130 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 MFSD14AQ96MC6 490 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 ZNF560Q96MR9 790 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 CYP4F11Q9HBI6 524 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 HCFC1R1Q9NWW0 138 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 HSPBP1Q9NZL4 362 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 CGNQ9P2M7 1197 aaKnown RBP12.13□□□□□ -0.47
BMP4-204ENST00000558961 ITGA11Q9UKX5 1188 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 CDH7Q9ULB5 785 aa12.13□□□□□ -0.47
BMP4-204ENST00000558961 PTPRJQ12913 1337 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 OBSL1O75147 1896 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 NUP210Q8TEM1 1887 aaPredicted RBP12.12□□□□□ -0.47
BMP4-204ENST00000558961 COL4A2P08572 1712 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 DENND4CQ5VZ89 1909 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 GOLGA8IPA6NC78 632 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 ZNF233A6NK53 670 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 GOLGA8JA6NMD2 632 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 KPNA7A9QM74 516 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 MICAL2O94851 1124 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 ITGB3P05106 788 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 RHOP08100 348 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 NDUFA8P51970 172 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 ARPP19P56211 112 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 SURF1Q15526 300 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 SLC5A9Q2M3M2 681 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 PRSS36Q5K4E3 855 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 CBWD2Q8IUF1 395 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 NPAS3Q8IXF0 933 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 FMR1NBQ8N0W7 255 aaPredicted RBP12.12□□□□□ -0.47
BMP4-204ENST00000558961 KIAA0895Q8NCT3 520 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 OR10T2Q8NGX3 314 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 ITFG1Q8TB96 612 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 CACTINQ8WUQ7 758 aaKnown RBP12.12□□□□□ -0.47
BMP4-204ENST00000558961 PBXIP1Q96AQ6 731 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 RTP3Q9BQQ7 232 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 GOLPH3LQ9H4A5 285 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 PCIF1Q9H4Z3 704 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 PDE11AQ9HCR9 933 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 POLIQ9UNA4 740 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 YIPF1Q9Y548 306 aa12.12□□□□□ -0.47
BMP4-204ENST00000558961 PTPRDP23468 1912 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 MTMR11A4FU01 709 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 CYB561D2O14569 222 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 OR4Q2P0C623 313 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 SRFP11831 508 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 PTPN2P17706 415 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 POLR2BP30876 1174 aaKnown RBP12.11□□□□□ -0.47
BMP4-204ENST00000558961 SYKP43405 635 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 TFAMQ00059 246 aaKnown RBP12.11□□□□□ -0.47
BMP4-204ENST00000558961 PSMD2Q13200 908 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 SNRNP35Q16560 246 aaKnown RBP12.11□□□□□ -0.47
BMP4-204ENST00000558961 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
BMP4-204ENST00000558961 ZSCAN23Q3MJ62 389 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 CENPPQ6IPU0 288 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 CAVIN1Q6NZI2 390 aaKnown RBP12.11□□□□□ -0.47
BMP4-204ENST00000558961 RBM43Q6ZSC3 357 aaKnown RBP12.11□□□□□ -0.47
BMP4-204ENST00000558961 HS2ST1Q7LGA3 356 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 WDR49Q8IV35 697 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 SLC44A3Q8N4M1 653 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 SPATA18Q8TC71 538 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 RSAD2Q8WXG1 361 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 MTMR12Q9C0I1 747 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 ZCWPW1Q9H0M4 648 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 CRISPLD1Q9H336 500 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 EXOC1Q9NV70 894 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 INTS13Q9NVM9 706 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 CEP72Q9P209 647 aa12.11□□□□□ -0.47
BMP4-204ENST00000558961 SIX4Q9UIU6 781 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms