RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 POM121BA6NF01 834 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 CXorf49A8MYA2 514 aaPredicted RBP5.36□□□□□ -1.55
CASC4-206ENST00000558847 PRR5-ARHGAP8B1AHC4 643 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 F5H423 210 aaPredicted RBP5.36□□□□□ -1.55
CASC4-206ENST00000558847 KIAA0391O15091 583 aaKnown RBP5.36□□□□□ -1.55
CASC4-206ENST00000558847 TBX3O15119 743 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 KPNA5O15131 536 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 PARP1P09874 1014 aaKnown RBP5.36□□□□□ -1.55
CASC4-206ENST00000558847 GNAT2P19087 354 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 ARFIP2P53365 341 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 SUMO3P55854 103 aaPredicted RBP5.36□□□□□ -1.55
CASC4-206ENST00000558847 TGFB2P61812 414 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 POU6F2P78424 691 aaPredicted RBP5.36□□□□□ -1.55
CASC4-206ENST00000558847 FOXE3Q13461 319 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 GRM7Q14831 915 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 C4orf46Q504U0 113 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 METTL24Q5JXM2 366 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 LMBRD2Q68DH5 695 aaPredicted RBP5.36□□□□□ -1.55
CASC4-206ENST00000558847 ZNF529Q6P280 563 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 FAM111BQ6SJ93 734 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 MAMDC4Q6UXC1 1216 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 ZNF365Q70YC5 407 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 SDR16C5Q8N3Y7 309 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 VPS37AQ8NEZ2 397 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 FBXO18Q8NFZ0 1043 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 EDAQ92838 391 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 CEP95Q96GE4 821 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 TMEM176AQ96HP8 235 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 MPHOSPH9Q99550 1183 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 HERPUD2Q9BSE4 406 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 BRIP1Q9BX63 1249 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 DPH1Q9BZG8 443 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 KCNH6Q9H252 994 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 CERS4Q9HA82 394 aa5.36□□□□□ -1.55
CASC4-206ENST00000558847 RGS17Q9UGC6 210 aaPredicted RBP5.36□□□□□ -1.55
CASC4-206ENST00000558847 ZMYM3Q14202 1370 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 USP19O94966 1318 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 TBKBP1A7MCY6 615 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 MFAP3LO75121 409 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 MATN4O95460 622 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 GJB1P08034 283 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 TNFAIP2Q03169 654 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 RAPGEF1Q13905 1077 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 BMT2Q1RMZ1 405 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 USP39Q53GS9 565 aaKnown RBP5.35□□□□□ -1.55
CASC4-206ENST00000558847 FAM209BQ5JX69 171 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 FKBP15Q5T1M5 1219 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 DRICH1Q6PGQ1 229 aaPredicted RBP5.35□□□□□ -1.55
CASC4-206ENST00000558847 RNF207Q6ZRF8 634 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 BEND5Q7L4P6 421 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 ZNF808Q8N4W9 903 aaPredicted RBP5.35□□□□□ -1.55
CASC4-206ENST00000558847 CCDC33Q8N5R6 958 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 DCBLD1Q8N8Z6 715 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 PPM1EQ8WY54 764 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 SCAMP4Q969E2 229 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 ZNF512Q96ME7 567 aaPredicted RBP5.35□□□□□ -1.55
CASC4-206ENST00000558847 NDC1Q9BTX1 674 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 ZNF518BQ9C0D4 1074 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 REXO4Q9GZR2 422 aaKnown RBP5.35□□□□□ -1.55
CASC4-206ENST00000558847 GPR35Q9HC97 309 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 HECAQ9UBI9 543 aaPredicted RBP5.35□□□□□ -1.55
CASC4-206ENST00000558847 SH3BP1Q9Y3L3 701 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 PLEKHM1Q9Y4G2 1056 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 CEP83Q9Y592 693 aa5.35□□□□□ -1.55
CASC4-206ENST00000558847 hCG_1642624A0A1W2PR95 340 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 TRIM43BA6NCK2 446 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 MYO1CO00159 1063 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 BTN3A1O00481 513 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 THAP12O43422 761 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 FGF18O76093 207 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 AHSGP02765 367 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 TSHRP16473 764 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 ACO1P21399 889 aaKnown RBP5.34□□□□□ -1.55
CASC4-206ENST00000558847 TECP42680 631 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 NOMO3P69849 1222 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 EXOSC9Q06265 439 aaKnown RBP5.34□□□□□ -1.55
CASC4-206ENST00000558847 ABHD18Q0P651 414 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 SLC13A2Q13183 592 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 AMOTQ4VCS5 1084 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 ATXN7L2Q5T6C5 722 aaPredicted RBP5.34□□□□□ -1.55
CASC4-206ENST00000558847 ANO1Q5XXA6 986 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 EFCAB12Q6NXP0 572 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 TFAP2CQ92754 450 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 TRIM43Q96BQ3 446 aaPredicted RBP5.34□□□□□ -1.55
CASC4-206ENST00000558847 MOGAT1Q96PD6 335 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 C1orf43Q9BWL3 253 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 SLAMF7Q9NQ25 335 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 SACM1LQ9NTJ5 587 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 SLC23A1Q9UHI7 598 aa5.34□□□□□ -1.55
CASC4-206ENST00000558847 TCRBV7S2A1N4TA0A589 114 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 KLRG2A4D1S0 409 aaPredicted RBP5.33□□□□□ -1.56
CASC4-206ENST00000558847 MBD3L4A6NDZ8 208 aaPredicted RBP5.33□□□□□ -1.56
CASC4-206ENST00000558847 MBD3L3A6NE82 208 aaPredicted RBP5.33□□□□□ -1.56
CASC4-206ENST00000558847 APOL1O14791 398 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 STC2O76061 302 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 INMTO95050 263 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 ZNF202O95125 648 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 XRCC6P12956 609 aaKnown RBP eCLIP5.33□□□□□ -1.56
CASC4-206ENST00000558847 KLRC1P26715 233 aa5.33□□□□□ -1.56
CASC4-206ENST00000558847 PPM1AP35813 382 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms