RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 BLIDQ8IZY5 108 aa11.39□□□□□ -0.59
TRAV33-201ENST00000557514 RPLP0P6Q8NHW5 317 aa11.39□□□□□ -0.59
TRAV33-201ENST00000557514 SUSD3Q96L08 255 aa11.39□□□□□ -0.59
TRAV33-201ENST00000557514 POLR3CQ9BUI4 534 aaPredicted RBP11.39□□□□□ -0.59
TRAV33-201ENST00000557514 C2orf40Q9H1Z8 148 aa11.39□□□□□ -0.59
TRAV33-201ENST00000557514 CRISPLD1Q9H336 500 aa11.39□□□□□ -0.59
TRAV33-201ENST00000557514 FBRSL1Q9HCM7 1045 aaKnown RBP11.39□□□□□ -0.59
TRAV33-201ENST00000557514 DAXXQ9UER7 740 aaPredicted RBP11.39□□□□□ -0.59
TRAV33-201ENST00000557514 USP20Q9Y2K6 914 aa11.39□□□□□ -0.59
TRAV33-201ENST00000557514 SPTA1P02549 2419 aa11.39□□□□□ -0.59
TRAV33-201ENST00000557514 ADAMTS20P59510 1910 aa11.39□□□□□ -0.59
TRAV33-201ENST00000557514 USO1O60763 962 aaKnown RBP11.38□□□□□ -0.59
TRAV33-201ENST00000557514 ENGP17813 658 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 FAM193AP78312 1265 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 RUNX3Q13761 415 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 USP39Q53GS9 565 aaKnown RBP11.38□□□□□ -0.59
TRAV33-201ENST00000557514 GPR158Q5T848 1215 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 NAIF1Q69YI7 327 aaPredicted RBP11.38□□□□□ -0.59
TRAV33-201ENST00000557514 KRT25Q7Z3Z0 450 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 RASSF3Q86WH2 238 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 EZH1Q92800 747 aaPredicted RBP11.38□□□□□ -0.59
TRAV33-201ENST00000557514 PSMG2Q969U7 264 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 HSD17B14Q9BPX1 270 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 ATXN3LQ9H3M9 355 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 CCDC86Q9H6F5 360 aaKnown RBP11.38□□□□□ -0.59
TRAV33-201ENST00000557514 SLC38A7Q9NVC3 462 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 THG1LQ9NWX6 298 aaKnown RBP11.38□□□□□ -0.59
TRAV33-201ENST00000557514 RAXQ9Y2V3 346 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 NUB1Q9Y5A7 615 aa11.38□□□□□ -0.59
TRAV33-201ENST00000557514 FGF19O95750 216 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 GABRR2P28476 465 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 RDXP35241 583 aaKnown RBP11.37□□□□□ -0.59
TRAV33-201ENST00000557514 DGKEP52429 567 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 EPHB3P54753 998 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 ARHGAP15Q53QZ3 475 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 GALNT17Q6IS24 598 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 ALKAL1Q6UXT8 129 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 NEK8Q86SG6 692 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 POTEDQ86YR6 584 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
TRAV33-201ENST00000557514 APPL2Q8NEU8 664 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 TSTD1Q8NFU3 115 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 BSNDQ8WZ55 320 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 PIGKQ92643 395 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 BRF1Q92994 677 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 LRIG1Q96JA1 1093 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 CNOT6LQ96LI5 555 aaKnown RBP11.37□□□□□ -0.59
TRAV33-201ENST00000557514 CCDC43Q96MW1 224 aaKnown RBP11.37□□□□□ -0.59
TRAV33-201ENST00000557514 ZMAT2Q96NC0 199 aaKnown RBP11.37□□□□□ -0.59
TRAV33-201ENST00000557514 EIF2AK1Q9BQI3 630 aaKnown RBP11.37□□□□□ -0.59
TRAV33-201ENST00000557514 NUSAP1Q9BXS6 441 aaKnown RBP11.37□□□□□ -0.59
TRAV33-201ENST00000557514 TPSD1Q9BZJ3 242 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 TASP1Q9H6P5 420 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 GKN1Q9NS71 199 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 INVSQ9Y283 1065 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 ASB3Q9Y575 518 aa11.37□□□□□ -0.59
TRAV33-201ENST00000557514 TNFRSF10BO14763 440 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 C1QL1O75973 258 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 HMGB1P09429 215 aaKnown RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 KCNE1P15382 129 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 DHPSP49366 369 aaPredicted RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 CYP4F8P98187 520 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 AMPD2Q01433 879 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 DUSP4Q13115 394 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 KRT32Q14532 448 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 PEAR1Q5VY43 1037 aaPredicted RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 TRIM68Q6AZZ1 485 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 SLC23A3Q6PIS1 610 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 CCNI2Q6ZMN8 369 aaPredicted RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 DNAJB7Q7Z6W7 309 aaPredicted RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 SYT12Q8IV01 421 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 CEP120Q8N960 986 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 MCPH1Q8NEM0 835 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 HNRNPLLQ8WVV9 542 aaKnown RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 ADAMTS14Q8WXS8 1223 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 DDX12PQ92771 950 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 PGLYRP2Q96PD5 576 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 P2RY13Q9BPV8 354 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 SMG9Q9H0W8 520 aaKnown RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 EBF3Q9H4W6 596 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 IL21Q9HBE4 155 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 TOPORSQ9NS56 1045 aaPredicted RBP11.36□□□□□ -0.59
TRAV33-201ENST00000557514 TBX20Q9UMR3 447 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 MYO18BQ8IUG5 2567 aa11.36□□□□□ -0.59
TRAV33-201ENST00000557514 MARCH6O60337 910 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 OAZ2O95190 189 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 OR4Q2P0C623 313 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 ARSAP15289 507 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 MCM4P33991 863 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 HOXD12P35452 270 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 GRM5P41594 1212 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 NAMPTP43490 491 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 ALDH1A3P47895 512 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 GALK1P51570 392 aa11.35□□□□□ -0.59
TRAV33-201ENST00000557514 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
TRAV33-201ENST00000557514 C19orf57Q0VDD7 668 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms