RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 GLYCTKQ8IVS8 523 aa15.47■□□□□ 0.07
ARHGEF40-208ENST00000557498 TTC39CQ8N584 583 aa15.47■□□□□ 0.07
ARHGEF40-208ENST00000557498 DDX1Q92499 740 aaKnown RBP15.47■□□□□ 0.07
ARHGEF40-208ENST00000557498 C16orf45Q96MC5 204 aaPredicted RBP15.47■□□□□ 0.07
ARHGEF40-208ENST00000557498 TSGA10Q9BZW7 698 aa15.47■□□□□ 0.07
ARHGEF40-208ENST00000557498 LZTFL1Q9NQ48 299 aa15.47■□□□□ 0.07
ARHGEF40-208ENST00000557498 SEPT11Q9NVA2 429 aaKnown RBP15.47■□□□□ 0.07
ARHGEF40-208ENST00000557498 SNX9Q9Y5X1 595 aa15.47■□□□□ 0.07
ARHGEF40-208ENST00000557498 MICAL3Q7RTP6 2002 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 PODXLO00592 558 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 SPTLC1O15269 473 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 CILPO75339 1184 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 POMCP01189 267 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 CALCAP01258 141 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 MMEP08473 750 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 RPL9P32969 192 aaKnown RBP15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 INCA1Q0VD86 236 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 TUSC3Q13454 348 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 PTPN14Q15678 1187 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 ALKBH5Q6P6C2 394 aaKnown RBP15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 CNKSR3Q6P9H4 555 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 DEFB128Q7Z7B8 93 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 UBE2Q1Q7Z7E8 422 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 URGCPQ8TCY9 931 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 MMS19Q96T76 1030 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 PRDM5Q9NQX1 630 aaPredicted RBP15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 GDAP2Q9NXN4 497 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 TFR2Q9UP52 801 aa15.46■□□□□ 0.07
ARHGEF40-208ENST00000557498 LTBP2Q14767 1821 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 TRIM43BA6NCK2 446 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 RCCD1A6NED2 376 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 CASTOR2A6NHX0 329 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 KPNA7A9QM74 516 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 PJA2O43164 708 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 TIMP1P01033 207 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 PAEPP09466 180 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 FGFR1P11362 822 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 EN2P19622 333 aaPredicted RBP15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 KIF5AQ12840 1032 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 NOMO2Q5JPE7 1267 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 PALB2Q86YC2 1186 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 TET1Q8NFU7 2136 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 WHAMMQ8TF30 809 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 TRIM43Q96BQ3 446 aaPredicted RBP15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 DDX27Q96GQ7 796 aaKnown RBP15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 UROC1Q96N76 676 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 PCDHB18PQ96TA0 734 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 LACRTQ9GZZ8 138 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 CACNG4Q9UBN1 327 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 BARX2Q9UMQ3 279 aaPredicted RBP15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 PCDHB7Q9Y5E2 793 aa15.45■□□□□ 0.06
ARHGEF40-208ENST00000557498 KIF2AO00139 706 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 THAP12O43422 761 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 KRT86O43790 486 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 CLCNKBP51801 687 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 NDST1P52848 882 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 RAD23BP54727 409 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 LILRA4P59901 499 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 ZNF394Q53GI3 561 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 TRIM72Q6ZMU5 477 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 LIMS2Q7Z4I7 341 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 TMEM176AQ96HP8 235 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 TWNKQ96RR1 684 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 MRPL45Q9BRJ2 306 aaKnown RBP15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 PACSIN1Q9BY11 444 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 ELOVL4Q9GZR5 314 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 HMGXB4Q9UGU5 601 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 PUF60Q9UHX1 559 aaKnown RBP15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 INTUQ9ULD6 942 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 LRFN2Q9ULH4 789 aa15.44■□□□□ 0.06
ARHGEF40-208ENST00000557498 ALPK3Q96L96 1907 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 TMCO5BA8MYB1 307 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 HOXA2O43364 376 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 TACC1O75410 805 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 ABL1P00519 1130 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 TUBB4AP04350 444 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 H2AFZP0C0S5 128 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 GZMAP12544 262 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 TNNT1P13805 278 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 RAG1P15918 1043 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 BRD2P25440 801 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 UPP1Q16831 310 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 CLEC16AQ2KHT3 1053 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 SOWAHAQ2M3V2 549 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 H2AFVQ71UI9 128 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 NPAS4Q8IUM7 802 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 ABI1Q8IZP0 508 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 TOP6BLQ8N6T0 577 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 SLC4A11Q8NBS3 891 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 VWCEQ96DN2 955 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 PDCL3Q9H2J4 239 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 TBC1D13Q9NVG8 400 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 TAS2R14Q9NYV8 317 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 GUCA1BQ9UMX6 200 aa15.43■□□□□ 0.06
ARHGEF40-208ENST00000557498 KIF5CO60282 957 aa15.42■□□□□ 0.06
ARHGEF40-208ENST00000557498 HUS1O60921 280 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms