RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 NDUFS3O75489 264 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 DARSP14868 501 aaKnown RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 VCLP18206 1134 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 TAB3Q8N5C8 712 aaPredicted RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 RIBC2Q9H4K1 309 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 LATS2Q9NRM7 1088 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 EIF3LQ9Y262 564 aaKnown RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 GDF11O95390 407 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ALDH1A1P00352 501 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CALB2P22676 271 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CASP4P49662 377 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 POLA2Q14181 598 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 R3HDM1Q15032 1099 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CHRNA2Q15822 529 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 LRRC24Q50LG9 513 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 MMGT1Q8N4V1 131 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ARHGEF26Q96DR7 871 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CCDC182A6NF36 153 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CAND2O75155 1236 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PAICSP22234 425 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 GPR1P46091 355 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PIGHQ14442 188 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 VEPH1Q14D04 833 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 TIGD7Q6NT04 549 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 F8W810 466 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 MTA1Q13330 715 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 MACC1Q6ZN28 852 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF786Q8N393 782 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 KCNV2Q8TDN2 545 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CABLES1Q8TDN4 633 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PJA1Q8NG27 643 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CLHC1Q8NHS4 586 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 KANSL2Q9H9L4 492 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ARHGEF11O15085 1522 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CYBBP04839 570 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 FAUP35544 74 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ACTN3Q08043 901 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 DGKHQ86XP1 1220 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 TNIP3Q96KP6 325 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PRMT1Q99873 361 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 EPB41L4BQ9H329 900 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 C8orf4Q9NR00 106 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 LGALS16A8MUM7 142 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 SOAT2O75908 522 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 GRK3P35626 688 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 YWHAZP63104 245 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 MAD2L1Q13257 205 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PPP1R18Q6NYC8 613 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 TAS2R42Q7RTR8 314 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF438Q7Z4V0 828 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 RCOR2Q8IZ40 523 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 XXYLT1Q8NBI6 393 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 IL17RAQ96F46 866 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF560Q96MR9 790 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 FAM129BQ96TA1 746 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 AP1M1Q9BXS5 423 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 REXO4Q9GZR2 422 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ENO3P13929 434 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 NPHS2Q9NP85 383 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CCDC177Q9NQR7 707 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CLDN3O15551 220 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 TCF4P15884 667 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CDK17Q00537 523 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PRPF39Q86UA1 669 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 GPR101Q96P66 508 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 DSN1Q9H410 356 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ARHGEF38Q9NXL2 777 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 TRAPPC3O43617 180 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 SARSP49591 514 aaKnown RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CCDC81Q6ZN84 652 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 LONP2Q86WA8 852 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ILKAPQ9H0C8 392 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 UGGT2Q9NYU1 1516 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 DPYSL4O14531 572 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ALAS1P13196 640 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 HECTD3Q5T447 861 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 UNC45AQ9H3U1 944 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 CRNNQ9UBG3 495 aaPredicted RBP9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PGK2P07205 417 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 SFNP31947 248 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 ITGA9Q13797 1035 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 NLRP10Q86W26 655 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 FICDQ9BVA6 458 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PKP3Q9Y446 797 aa9.2□□□□□ -0.94
SYNE3-205ENST00000557275 PEG3Q9GZU2 1588 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF200P98182 395 aaPredicted RBP9.19□□□□□ -0.94
SYNE3-205ENST00000557275 ABCB5Q2M3G0 1257 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 SULF1Q8IWU6 871 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 TGFBRAP1Q8WUH2 860 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 MPOP05164 745 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 TMIEQ8NEW7 156 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 MYH15Q9Y2K3 1946 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 AGAP9Q5VTM2 703 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 HAUS6Q7Z4H7 955 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 IZUMO1Q8IYV9 350 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 AMER2Q8N7J2 671 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 RORBQ92753 470 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 RPS6KB2Q9UBS0 482 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms