RNA–Protein interactions for RNA: ENST00000556903.2

FDPSP3-201, Transcript of farnesyl diphosphate synthase pseudogene 3, humanhuman

BASIC

Gene FDPSP3, Length 1,013 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPSP3-201ENST00000556903 CST3P01034 146 aaPredicted RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 MSNP26038 577 aaKnown RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 LRPAP1P30533 357 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 POLR2BP30876 1174 aaKnown RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 CYLC1P35663 651 aaPredicted RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 MLH1P40692 756 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 PRKCIP41743 596 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 CCZ1BP86790 482 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 CCZ1P86791 482 aaPredicted RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 APBA1Q02410 837 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 KLHL30Q0D2K2 578 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 GRIK3Q13003 919 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 ARHGAP44Q17R89 818 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 TDRD12Q587J7 1177 aaKnown RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 GLRA4Q5JXX5 417 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 GJB7Q6PEY0 223 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 AGMOQ6ZNB7 445 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 RTN4RL1Q86UN2 441 aaPredicted RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 FAM71AQ8IYT1 594 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 SHC3Q92529 594 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 DDX27Q96GQ7 796 aaKnown RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 CCDC42Q96M95 316 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 UROC1Q96N76 676 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 ZMAT2Q96NC0 199 aaKnown RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 PPP1R10Q96QC0 940 aaKnown RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 RAD9AQ99638 391 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 PI4K2AQ9BTU6 479 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 DNAI2Q9GZS0 605 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 DEF6Q9H4E7 631 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 CYP3A43Q9HB55 503 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 SIX4Q9UIU6 781 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 LRFN2Q9ULH4 789 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 COG5Q9UP83 839 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 PCDHB7Q9Y5E2 793 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 COL4A4P53420 1690 aaPredicted RBP8.37□□□□□ -1.07
FDPSP3-201ENST00000556903 CITO14578 2027 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 ANO9A1A5B4 782 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 TNFRSF10AO00220 468 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 PTGESO14684 152 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 LRRN2O75325 713 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 KRT5P13647 590 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 IBSPP21815 317 aaPredicted RBP8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 RPL9P32969 192 aaKnown RBP8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 USP8P40818 1118 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 TAF6P49848 677 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 SCNN1GP51170 649 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 TNNC1P63316 161 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 CCDC85BQ15834 202 aaPredicted RBP8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 WDR72Q3MJ13 1102 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 SV2CQ496J9 727 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 NOMO2Q5JPE7 1267 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 C9orf57Q5W0N0 161 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 SPOPLQ6IQ16 392 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 WDR59Q6PJI9 974 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 NPAS4Q8IUM7 802 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 TMEM139Q8IV31 216 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 TXLNBQ8N3L3 684 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 CXorf38Q8TB03 319 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 LINC01599Q8WXQ3 324 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 PPM1EQ8WY54 764 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 LPPQ93052 612 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 TATDN2Q93075 761 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 C18orf25Q96B23 403 aaPredicted RBP8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 FAM84AQ96KN4 292 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 ZFP42Q96MM3 310 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 KREMEN1Q96MU8 473 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 ZBED2Q9BTP6 218 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 XYLT2Q9H1B5 865 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 NHEJ1Q9H9Q4 299 aaPredicted RBP8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 APOBEC3GQ9HC16 384 aaKnown RBP8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 PRDM6Q9NQX0 595 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 TUBGCP4Q9UGJ1 667 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 INSL6Q9Y581 213 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 NUB1Q9Y5A7 615 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 RALGAPA2Q2PPJ7 1873 aa8.36□□□□□ -1.07
FDPSP3-201ENST00000556903 ARHGEF37A1IGU5 675 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 PIRO00625 290 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 ZSCAN12O43309 604 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 AKR1B10O60218 316 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 NDUFA10O95299 355 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 AMHP03971 560 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 FAM163BP0C2L3 166 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 EIF4A3P38919 411 aaKnown RBP8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 GUCY2FP51841 1108 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 ERVK-21P61565 698 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 KRT83P78385 493 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 DEFB103AP81534 67 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 HTRA4P83105 476 aaPredicted RBP8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 ARID5AQ03989 594 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 PTK2Q05397 1052 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 TUSC3Q13454 348 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 SPA17Q15506 151 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 HGSNATQ68CP4 663 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 IRF2BP2Q7Z5L9 587 aa8.35□□□□□ -1.07
FDPSP3-201ENST00000556903 GSTCDQ8NEC7 633 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms