RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ADAM15Q13444 863 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 KCNC3Q14003 757 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 MRPL58Q14197 206 aaKnown RBP18.8■□□□□ 0.6
SHMT2-225ENST00000556798 COL19A1Q14993 1142 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 TPD52L1Q16890 204 aaPredicted RBP18.8■□□□□ 0.6
SHMT2-225ENST00000556798 CTC1Q2NKJ3 1217 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 WSCD1Q658N2 575 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 OVOS1Q6IE37 1185 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 ZNF280DQ6N043 979 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 FRMD5Q7Z6J6 570 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 SLC22A17Q8WUG5 538 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 SLC35C1Q96A29 364 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 DNAJC25Q9H1X3 360 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 UBE2ZQ9H832 354 aaPredicted RBP18.8■□□□□ 0.6
SHMT2-225ENST00000556798 METTL14Q9HCE5 456 aaKnown RBP18.8■□□□□ 0.6
SHMT2-225ENST00000556798 TMEM8AQ9HCN3 771 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 FBXL5Q9UKA1 691 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 BACE2Q9Y5Z0 518 aa18.8■□□□□ 0.6
SHMT2-225ENST00000556798 XIRP2A4UGR9 3374 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 SYCE3A1L190 88 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 H7C4K7 107 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 FGFR1OPO95684 399 aaKnown RBP18.79■□□□□ 0.6
SHMT2-225ENST00000556798 CYP11A1P05108 521 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 SPATA31D3P0C874 917 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 OR1D2P34982 312 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 LTBRP36941 435 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 MXI1P50539 228 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 ARPP19P56211 112 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 MCCD1P59942 119 aaPredicted RBP18.79■□□□□ 0.6
SHMT2-225ENST00000556798 ZNF699Q32M78 642 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 CBWD6Q4V339 395 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 CBWD3Q5JTY5 395 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 CBWD5Q5RIA9 395 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 SPATA31D4Q6ZUB0 917 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 CREBRFQ8IUR6 639 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 PDCL2Q8N4E4 241 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 TAS1R2Q8TE23 839 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 HLA-CQ95604 372 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 CNOT6LQ96LI5 555 aaKnown RBP18.79■□□□□ 0.6
SHMT2-225ENST00000556798 XYLT2Q9H1B5 865 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 GDAP2Q9NXN4 497 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 L1RE1Q9UN81 338 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 POLIQ9UNA4 740 aa18.79■□□□□ 0.6
SHMT2-225ENST00000556798 ARHGEF37A1IGU5 675 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 H3BQ06 376 aaPredicted RBP18.78■□□□□ 0.6
SHMT2-225ENST00000556798 NCK2O43639 380 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 TBC1D4O60343 1298 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 HUS1O60921 280 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 LRRN2O75325 713 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 OAZ2O95190 189 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 GNA14O95837 355 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 GLUD1P00367 558 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 KCNA5P22460 613 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 GTF2H1P32780 548 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 TFF2Q03403 129 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 CLUL1Q15846 466 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 WDR72Q3MJ13 1102 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 HSP90AA4PQ58FG1 418 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 KRT39Q6A163 491 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 SPOPLQ6IQ16 392 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 PPFIBP1Q86W92 1011 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 METTL23Q86XA0 190 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 PI4K2AQ9BTU6 479 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 CLEC1BQ9P126 229 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 NXF1Q9UBU9 619 aaKnown RBP18.78■□□□□ 0.6
SHMT2-225ENST00000556798 DSEQ9UL01 958 aa18.78■□□□□ 0.6
SHMT2-225ENST00000556798 SPTBN5Q9NRC6 3674 aaKnown RBP18.78■□□□□ 0.6
SHMT2-225ENST00000556798 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.77■□□□□ 0.6
SHMT2-225ENST00000556798 FSD2A1L4K1 749 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 TGM5O43548 720 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 HCRTO43612 131 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 STX10O60499 249 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 STAU1O95793 577 aaKnown RBP18.77■□□□□ 0.6
SHMT2-225ENST00000556798 OR4Q2P0C623 313 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 CCDC192P0DO97 292 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 ATICP31939 592 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 TNNC1P63316 161 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 ROR1Q01973 937 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 SOWAHAQ2M3V2 549 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 SKOR2Q2VWA4 1001 aaPredicted RBP18.77■□□□□ 0.6
SHMT2-225ENST00000556798 CT47A1Q5JQC4 288 aaPredicted RBP18.77■□□□□ 0.6
SHMT2-225ENST00000556798 SCARA5Q6ZMJ2 495 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 OSTM1Q86WC4 334 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 IRF2BP1Q8IU81 584 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 TRIM59Q8IWR1 403 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 ADGRF2Q8IZF7 708 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 TOP6BLQ8N6T0 577 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 OR10T2Q8NGX3 314 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 CASP10Q92851 521 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 TMEM209Q96SK2 561 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 MMS19Q96T76 1030 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 RTP3Q9BQQ7 232 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 APOL5Q9BWW9 433 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 MAN1C1Q9NR34 630 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 THEGQ9P2T0 379 aa18.77■□□□□ 0.6
SHMT2-225ENST00000556798 DOCK6Q96HP0 2047 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 TCF20Q9UGU0 1960 aaKnown RBP18.76■□□□□ 0.59
SHMT2-225ENST00000556798 WDR27A2RRH5 827 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 SRGAP2BP0DMP2 458 aa18.76■□□□□ 0.59
SHMT2-225ENST00000556798 CPB1P15086 417 aa18.76■□□□□ 0.59
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