RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ODC1P11926 461 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 IBSPP21815 317 aaPredicted RBP12.07□□□□□ -0.48
FOXN3-212ENST00000556541 WARSP23381 471 aaKnown RBP12.07□□□□□ -0.48
FOXN3-212ENST00000556541 LHX1P48742 406 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 MFAP3P55082 362 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 TIGD5Q53EQ6 642 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 FAM117BQ6P1L5 589 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 FUT10Q6P4F1 479 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 UNC93AQ86WB7 457 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 APPL2Q8NEU8 664 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 SHC3Q92529 594 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 SYN2Q92777 582 aaPredicted RBP12.07□□□□□ -0.48
FOXN3-212ENST00000556541 TMEM169Q96HH4 297 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 FAM84AQ96KN4 292 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 SENP8Q96LD8 212 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 TGS1Q96RS0 853 aaKnown RBP12.07□□□□□ -0.48
FOXN3-212ENST00000556541 CRACR2AQ9BSW2 395 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 LSM14BQ9BX40 385 aaKnown RBP12.07□□□□□ -0.48
FOXN3-212ENST00000556541 STK33Q9BYT3 514 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 PBX4Q9BYU1 374 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 DNAI2Q9GZS0 605 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 LMAN2LQ9H0V9 348 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 CHST7Q9NS84 486 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 IMPACTQ9P2X3 320 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 SSX2IPQ9Y2D8 614 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 COL6A3P12111 3177 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 LCHNA4D1U4 455 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 SOD2P04179 222 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 TRIM21P19474 475 aaKnown RBP12.06□□□□□ -0.48
FOXN3-212ENST00000556541 JAM2P57087 298 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 CREMQ03060 361 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 TAP1Q03518 808 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 KRT17Q04695 432 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 TBX2Q13207 712 aaPredicted RBP12.06□□□□□ -0.48
FOXN3-212ENST00000556541 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
FOXN3-212ENST00000556541 SOWAHAQ2M3V2 549 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 FAM109BQ6ICB4 259 aaPredicted RBP12.06□□□□□ -0.48
FOXN3-212ENST00000556541 PDE12Q6L8Q7 609 aaKnown RBP12.06□□□□□ -0.48
FOXN3-212ENST00000556541 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 TATDN2Q93075 761 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 C11orf84Q9BUA3 381 aaPredicted RBP12.06□□□□□ -0.48
FOXN3-212ENST00000556541 HCSTQ9UBK5 93 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 BARX2Q9UMQ3 279 aaPredicted RBP12.06□□□□□ -0.48
FOXN3-212ENST00000556541 CAPN11Q9UMQ6 739 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 PRG3Q9Y2Y8 225 aaPredicted RBP12.06□□□□□ -0.48
FOXN3-212ENST00000556541 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 IRAK3Q9Y616 596 aa12.06□□□□□ -0.48
FOXN3-212ENST00000556541 PTPRDP23468 1912 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 CYB561D2O14569 222 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 LRRN2O75325 713 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 CILPO75339 1184 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 FGF18O76093 207 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 ADCY5O95622 1261 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 ITGB1P05556 798 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 CA3P07451 260 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 ACO1P21399 889 aaKnown RBP12.05□□□□□ -0.48
FOXN3-212ENST00000556541 HNRNPH3P31942 346 aaKnown RBP12.05□□□□□ -0.48
FOXN3-212ENST00000556541 ZNF132P52740 706 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 RABGGTBP53611 331 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 DSG1Q02413 1049 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 MEA1Q16626 185 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 USP41Q3LFD5 358 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 SPOUT1Q5T280 376 aaKnown RBP12.05□□□□□ -0.48
FOXN3-212ENST00000556541 SCARA3Q6AZY7 606 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 IQCEQ6IPM2 695 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 SPOPLQ6IQ16 392 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 DSTYKQ6XUX3 929 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 ANKS3Q6ZW76 656 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 TMEM173Q86WV6 379 aaPredicted RBP12.05□□□□□ -0.48
FOXN3-212ENST00000556541 ARHGEF19Q8IW93 802 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 FAM71AQ8IYT1 594 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 PPM1KQ8N3J5 372 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 PDCL2Q8N4E4 241 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 BCL7CQ8WUZ0 217 aaPredicted RBP12.05□□□□□ -0.48
FOXN3-212ENST00000556541 KBTBD7Q8WVZ9 684 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 PIK3R5Q8WYR1 880 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 KREMEN1Q96MU8 473 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 PI4K2AQ9BTU6 479 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.05□□□□□ -0.48
FOXN3-212ENST00000556541 DNAJC12Q9UKB3 198 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 KIAA1257Q9ULG3 409 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 L1RE1Q9UN81 338 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 YBX2Q9Y2T7 364 aaKnown RBP12.05□□□□□ -0.48
FOXN3-212ENST00000556541 BACE2Q9Y5Z0 518 aa12.05□□□□□ -0.48
FOXN3-212ENST00000556541 COL4A4P53420 1690 aaPredicted RBP12.04□□□□□ -0.48
FOXN3-212ENST00000556541 OR6C75A6NL08 312 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 F8VZ95 297 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 H3BNC9 293 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 H7C4K7 107 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 EPHB6O15197 1021 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 TBC1D4O60343 1298 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 GYPCP04921 128 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 PAEPP09466 180 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 TPM1P09493 284 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 CCDC172P0C7W6 258 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 CTSAP10619 480 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 DNAJB2P25686 324 aa12.04□□□□□ -0.48
FOXN3-212ENST00000556541 PCSK1P29120 753 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms