RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FOXR2Q6PJQ5 311 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-221ENST00000556534 TMPRSS9Q7Z410 1059 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 DAAM2Q86T65 1068 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 COL23A1Q86Y22 540 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-221ENST00000556534 FAM43AQ8N2R8 423 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 AMER2Q8N7J2 671 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 LRIG1Q96JA1 1093 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 MRGPRX1Q96LB2 322 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 NT5C1BQ96P26 610 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 GALNT9Q9HCQ5 603 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 ETAA1Q9NY74 926 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 CHPF2Q9P2E5 772 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 ING1Q9UK53 422 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-221ENST00000556534 MTO1Q9Y2Z2 717 aaKnown RBP5.83□□□□□ -1.48
SCFD1-221ENST00000556534 NOX1Q9Y5S8 564 aa5.83□□□□□ -1.48
SCFD1-221ENST00000556534 A0A1W2PS29 197 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 GRID2IPA4D2P6 1211 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 ERN1O75460 977 aaKnown RBP5.82□□□□□ -1.48
SCFD1-221ENST00000556534 SUN1O94901 812 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 CHEK2O96017 543 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 FSHBP01225 129 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 KCNA2P16389 499 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 ATF3P18847 181 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 KRT4P19013 534 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 HDCP19113 662 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 GDF5P43026 501 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 VAV2P52735 878 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 SOX8P57073 446 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 MC2RQ01718 297 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 PIGFQ07326 219 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 ZNF844Q08AG5 666 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 FGL2Q14314 439 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 GALEQ14376 348 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 GBX1Q14549 363 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 GRM3Q14832 879 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 SPDYE7PQ495Y7 208 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 ARHGAP29Q52LW3 1261 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 NPNTQ6UXI9 565 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 PPP1R32Q7Z5V6 425 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 WDR75Q8IWA0 830 aaKnown RBP5.82□□□□□ -1.48
SCFD1-221ENST00000556534 KIAA0319LQ8IZA0 1049 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 SLC16A11Q8NCK7 471 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 NEU4Q8WWR8 484 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-221ENST00000556534 WDR11Q9BZH6 1224 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 PCED1AQ9H1Q7 454 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 SERHL2Q9H4I8 314 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 ATP6V0A4Q9HBG4 840 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 PCDHA6Q9UN73 950 aa5.82□□□□□ -1.48
SCFD1-221ENST00000556534 CCDC195A0A1B0GUA6 201 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 GOLGA6CA6NDK9 693 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 GOLGA6BA6NDN3 693 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 FOSP01100 380 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-221ENST00000556534 SLPIP03973 132 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 GOLGA6DP0CG33 693 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 NPR1P16066 1061 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 ZEB1P37275 1124 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-221ENST00000556534 HABP2Q14520 560 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-221ENST00000556534 PTPAQ15257 358 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 GFOD2Q3B7J2 385 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 USP51Q70EK9 711 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 GPR149Q86SP6 731 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 ULK2Q8IYT8 1036 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 NSUN7Q8NE18 718 aaKnown RBP5.81□□□□□ -1.48
SCFD1-221ENST00000556534 CNPPD1Q9BV87 410 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 UNKLQ9H9P5 680 aaKnown RBP5.81□□□□□ -1.48
SCFD1-221ENST00000556534 ZMAT3Q9HA38 289 aaKnown RBP5.81□□□□□ -1.48
SCFD1-221ENST00000556534 RSAD1Q9HA92 442 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 SARS2Q9NP81 518 aaKnown RBP5.81□□□□□ -1.48
SCFD1-221ENST00000556534 OBP2AQ9NY56 170 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 GOLGA6AQ9NYA3 693 aa5.81□□□□□ -1.48
SCFD1-221ENST00000556534 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-221ENST00000556534 PRAMEF33A0A0G2JMD5 474 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 PIPSLA2A3N6 862 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 MYADML2A6NDP7 307 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 M0QYG6 137 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 CYR61O00622 381 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 AKAP8O43823 692 aaKnown RBP5.8□□□□□ -1.48
SCFD1-221ENST00000556534 PRAMEF10O60809 474 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 DNAJB5O75953 348 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 KIF20AO95235 890 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 GNAI2P04899 355 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 EGR2P11161 476 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-221ENST00000556534 ANXA11P50995 505 aaKnown RBP5.8□□□□□ -1.48
SCFD1-221ENST00000556534 KHDC1LQ5JSQ8 128 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 CYB5RLQ6IPT4 315 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 Q6YL49 198 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 CLNKQ7Z7G1 428 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 LDLRAD3Q86YD5 345 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 VRK3Q8IV63 474 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 TMEM125Q96AQ2 219 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 TRIB1Q96RU8 372 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 SMOQ99835 787 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 TMPRSS5Q9H3S3 457 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 CPA4Q9UI42 421 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 MED16Q9Y2X0 877 aa5.8□□□□□ -1.48
SCFD1-221ENST00000556534 CAPN8A6NHC0 703 aa5.79□□□□□ -1.48
SCFD1-221ENST00000556534 POLRMTO00411 1230 aaKnown RBP5.79□□□□□ -1.48
SCFD1-221ENST00000556534 PIM1P11309 404 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-221ENST00000556534 TOB1P50616 345 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms