RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 TMC2Q8TDI7 906 aa24.64■■□□□ 1.54
CDKN3-208ENST00000555837 ACSF2Q96CM8 615 aaPredicted RBP24.64■■□□□ 1.54
CDKN3-208ENST00000555837 APOL5Q9BWW9 433 aa24.64■■□□□ 1.54
CDKN3-208ENST00000555837 PRKD2Q9BZL6 878 aa24.64■■□□□ 1.54
CDKN3-208ENST00000555837 USTQ9Y2C2 406 aa24.64■■□□□ 1.54
CDKN3-208ENST00000555837 IKBKBO14920 756 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 CETN3O15182 167 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 TBC1D4O60343 1298 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 GADD45BO75293 160 aaPredicted RBP24.63■■□□□ 1.53
CDKN3-208ENST00000555837 ABLIM3O94929 683 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 C8AP07357 584 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 PSMC2P35998 433 aaKnown RBP24.63■■□□□ 1.53
CDKN3-208ENST00000555837 ROR1Q01973 937 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 LRRC63Q05C16 580 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 ADAM9Q13443 819 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 ELMOD1Q8N336 334 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 TRIML1Q8N9V2 468 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 ZSWIM2Q8NEG5 633 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 SMG7Q92540 1137 aaKnown RBP24.63■■□□□ 1.53
CDKN3-208ENST00000555837 GDAP2Q9NXN4 497 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 AFF4Q9UHB7 1163 aaKnown RBP24.63■■□□□ 1.53
CDKN3-208ENST00000555837 MAPK8IP1Q9UQF2 711 aa24.63■■□□□ 1.53
CDKN3-208ENST00000555837 STX10O60499 249 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 LRG1P02750 347 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 ATICP31939 592 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 ARPP19P56211 112 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 BFSP1Q12934 665 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 PLD1Q13393 1074 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 OTOP3Q7RTS5 596 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 TRAPPC11Q7Z392 1133 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 C12orf76Q8N812 135 aaPredicted RBP24.62■■□□□ 1.53
CDKN3-208ENST00000555837 C2orf15Q8WU43 125 aaKnown RBP24.62■■□□□ 1.53
CDKN3-208ENST00000555837 DHTKD1Q96HY7 919 aaPredicted RBP24.62■■□□□ 1.53
CDKN3-208ENST00000555837 HPDLQ96IR7 371 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 MKNK1Q9BUB5 465 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 HSFX1Q9UBD0 423 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 XIRP2A4UGR9 3374 aa24.62■■□□□ 1.53
CDKN3-208ENST00000555837 VWA8A3KMH1 1905 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 MTCL1Q9Y4B5 1905 aaKnown RBP24.61■■□□□ 1.53
CDKN3-208ENST00000555837 C19orf67A6NJJ6 358 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 FAM163BP0C2L3 166 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 SPATA31D3P0C874 917 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 LHX1P48742 406 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 FKBP3Q00688 224 aaKnown RBP24.61■■□□□ 1.53
CDKN3-208ENST00000555837 MYL7Q01449 175 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 SPATA31D4Q6ZUB0 917 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 TCEAL8Q8IYN2 117 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 DCP1BQ8IZD4 617 aaKnown RBP24.61■■□□□ 1.53
CDKN3-208ENST00000555837 TOP6BLQ8N6T0 577 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 PARD3BQ8TEW8 1205 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 SYAP1Q96A49 352 aaPredicted RBP24.61■■□□□ 1.53
CDKN3-208ENST00000555837 TCF20Q9UGU0 1960 aaKnown RBP24.61■■□□□ 1.53
CDKN3-208ENST00000555837 A0A0C4DFX4 3053 aa24.61■■□□□ 1.53
CDKN3-208ENST00000555837 BICDL2A1A5D9 508 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 EPB41P11171 864 aaKnown RBP24.6■■□□□ 1.53
CDKN3-208ENST00000555837 P4HA1P13674 534 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 ALADP13716 330 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 IGFBP6P24592 240 aaPredicted RBP24.6■■□□□ 1.53
CDKN3-208ENST00000555837 CLDN10P78369 228 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 TSPY1Q01534 308 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 GPR17Q13304 367 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 BIRC3Q13489 604 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 SLC7A14Q8TBB6 771 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 CYP4F11Q9HBI6 524 aa24.6■■□□□ 1.53
CDKN3-208ENST00000555837 ZFP37Q9Y6Q3 630 aaPredicted RBP24.6■■□□□ 1.53
CDKN3-208ENST00000555837 PPEF2O14830 753 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 SPTLC1O15269 473 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 STAU1O95793 577 aaKnown RBP24.59■■□□□ 1.53
CDKN3-208ENST00000555837 TRIM21P19474 475 aaKnown RBP24.59■■□□□ 1.53
CDKN3-208ENST00000555837 PCSK1P29120 753 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 PRCPP42785 496 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 CENPPQ6IPU0 288 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 FOXR2Q6PJQ5 311 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 FAM186BQ8IYM0 893 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 TDRD5Q8NAT2 981 aaKnown RBP24.59■■□□□ 1.53
CDKN3-208ENST00000555837 OR5B17Q8NGF7 314 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 RPGRIP1Q96KN7 1286 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 DNAI2Q9GZS0 605 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 WDR6Q9NNW5 1121 aaKnown RBP24.59■■□□□ 1.53
CDKN3-208ENST00000555837 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.59■■□□□ 1.53
CDKN3-208ENST00000555837 TIMM13Q9Y5L4 95 aaPredicted RBP24.59■■□□□ 1.53
CDKN3-208ENST00000555837 SNX9Q9Y5X1 595 aa24.59■■□□□ 1.53
CDKN3-208ENST00000555837 WDR27A2RRH5 827 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 LOC730098B7Z3J9 87 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 ADAM12O43184 909 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 VAMP7P51809 220 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 WNT7BP56706 349 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 TNNC1P63316 161 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 NFE2Q16621 373 aaPredicted RBP24.58■■□□□ 1.53
CDKN3-208ENST00000555837 IQCEQ6IPM2 695 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 RSPO2Q6UXX9 243 aaPredicted RBP24.58■■□□□ 1.53
CDKN3-208ENST00000555837 ADSSL1Q8N142 457 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 LEMD2Q8NC56 503 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 CCDC150Q8NCX0 1101 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 TAF4BQ92750 862 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 IMPG2Q9BZV3 1241 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 POMKQ9H5K3 350 aa24.58■■□□□ 1.53
CDKN3-208ENST00000555837 RFPL2O75678 378 aa24.57■■□□□ 1.52
CDKN3-208ENST00000555837 CLSTN1O94985 981 aa24.57■■□□□ 1.52
CDKN3-208ENST00000555837 FGFR1OPO95684 399 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms