RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TMEM191CA6NGB0 347 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 TMEM191BP0C7N4 346 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 CREB1P16220 341 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 MMP8P22894 467 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 NLRP11P59045 1033 aaKnown RBP17.12■□□□□ 0.33
TUBB3-209ENST00000555609 MPP2Q14168 576 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 EMC2Q15006 297 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 TMEM270Q6UE05 265 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 PCGF5Q86SE9 256 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 CEP57Q86XR8 500 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 ALLCQ8N6M5 410 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 ARHGEF3Q9NR81 526 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 SLC24A2Q9UI40 661 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 EFR3BQ9Y2G0 817 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 CD2APQ9Y5K6 639 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 RASA4BC9J798 803 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 RASA4O43374 803 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 ATG7O95352 703 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 TAC1P20366 129 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 ARL2P36404 184 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 POLGP54098 1239 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 PIGHQ14442 188 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 P3H1Q32P28 736 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 ZC3H12AQ5D1E8 599 aaKnown RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 TRMT1LQ7Z2T5 733 aaKnown RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 TBC1D1Q86TI0 1168 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 TRABD2AQ86V40 505 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 SRRM1Q8IYB3 904 aaKnown RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 CYP4X1Q8N118 509 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 UBR7Q8N806 425 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 REPS2Q8NFH8 660 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 DEPTORQ8TB45 409 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 NKD2Q969F2 451 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 SLITRK1Q96PX8 696 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 IMPG2Q9BZV3 1241 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 DHX33Q9H6R0 707 aaKnown RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 APOBEC3GQ9HC16 384 aaKnown RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 SSU72Q9NP77 194 aaKnown RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 ZNF277Q9NRM2 450 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-209ENST00000555609 CTNNAL1Q9UBT7 734 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 BAIAP2L1Q9UHR4 511 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 ADAMTS5Q9UNA0 930 aa17.11■□□□□ 0.33
TUBB3-209ENST00000555609 A0A0B4J269 797 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 K7ERI5 159 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 SMAPO00193 183 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 ALOX15BO15296 676 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 CCNB1P14635 433 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 CCND1P24385 295 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 SOX10P56693 466 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 NOP14P78316 857 aaKnown RBP17.1■□□□□ 0.33
TUBB3-209ENST00000555609 LLGL1Q15334 1064 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 SPDYAQ5MJ70 313 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 CCDC60Q8IWA6 550 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-209ENST00000555609 NIPA2Q8N8Q9 360 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 TCP11Q8WWU5 503 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 KLHL29Q96CT2 875 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 C12orf42Q96LP6 360 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 NIFKQ9BYG3 293 aaKnown RBP17.1■□□□□ 0.33
TUBB3-209ENST00000555609 PITPNM3Q9BZ71 974 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 AGAP1Q9UPQ3 857 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 SHOC2Q9UQ13 582 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 PPME1Q9Y570 386 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 EXOC1LA0A1B0GW35 172 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 ASMTLO95671 621 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 ITGAVP06756 1048 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 ICAM3P32942 547 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 RFC5P40937 340 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 BACE1P56817 501 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 MTMR2Q13614 643 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 SPARCL1Q14515 664 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 SURF1Q15526 300 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 ASRGL1Q7L266 308 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 DENND1AQ8TEH3 1009 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 FBF1Q8TES7 1133 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 ATG4CQ96DT6 458 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 RAB3IPQ96QF0 476 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-209ENST00000555609 SYT17Q9BSW7 474 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 MSTO1Q9BUK6 570 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 CXorf56Q9H5V9 222 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 EBF2Q9HAK2 575 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 SAYSD1Q9NPB0 183 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 TXLNGQ9NUQ3 528 aa17.1■□□□□ 0.33
TUBB3-209ENST00000555609 MAFBQ9Y5Q3 323 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-209ENST00000555609 CNTNAP2Q9UHC6 1331 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 WFS1O76024 890 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 RGS20O76081 388 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 CALCAP01258 141 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 CETPP11597 493 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 CDH5P33151 784 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-209ENST00000555609 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
TUBB3-209ENST00000555609 VPS41P49754 854 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 VCPP55072 806 aaKnown RBP17.09■□□□□ 0.33
TUBB3-209ENST00000555609 ZNF280AP59817 542 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-209ENST00000555609 ZPBP2Q6X784 338 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 CENPUQ71F23 418 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 POLNQ7Z5Q5 900 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-209ENST00000555609 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms