RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 C18orf25Q96B23 403 aaPredicted RBP11.9□□□□□ -0.5
XRCC3-213ENST00000555451 TRIM43Q96BQ3 446 aaPredicted RBP11.9□□□□□ -0.5
XRCC3-213ENST00000555451 LACRTQ9GZZ8 138 aa11.9□□□□□ -0.5
XRCC3-213ENST00000555451 CXCL16Q9H2A7 254 aa11.9□□□□□ -0.5
XRCC3-213ENST00000555451 SEPT11Q9NVA2 429 aaKnown RBP11.9□□□□□ -0.5
XRCC3-213ENST00000555451 PRKAG2Q9UGJ0 569 aa11.9□□□□□ -0.5
XRCC3-213ENST00000555451 TBX21Q9UL17 535 aa11.9□□□□□ -0.5
XRCC3-213ENST00000555451 POLIQ9UNA4 740 aa11.9□□□□□ -0.5
XRCC3-213ENST00000555451 CEP290O15078 2479 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 TRIOBPQ9H2D6 2365 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 RCCD1A6NED2 376 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 C9IYK1 514 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 INPPL1O15357 1258 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 RTN2O75298 545 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 EOMESO95936 686 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 THP07101 528 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 MMEP08473 750 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 PAEPP09466 180 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 CHRNB2P17787 502 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 CD58P19256 250 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 MAGEA10P43363 369 aaPredicted RBP11.89□□□□□ -0.51
XRCC3-213ENST00000555451 TAF6P49848 677 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 FMO1Q01740 532 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 INCA1Q0VD86 236 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 GRIK3Q13003 919 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 PLEKHG4Q58EX7 1191 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 TAF3Q5VWG9 929 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 SYT10Q6XYQ8 523 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 ZNF598Q86UK7 904 aaKnown RBP11.89□□□□□ -0.51
XRCC3-213ENST00000555451 RNF10Q8N5U6 811 aaKnown RBP11.89□□□□□ -0.51
XRCC3-213ENST00000555451 SEPT8Q92599 483 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 LPPQ93052 612 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 SECISBP2LQ93073 1101 aaKnown RBP11.89□□□□□ -0.51
XRCC3-213ENST00000555451 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 GAD1Q99259 594 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
XRCC3-213ENST00000555451 HIPK3Q9H422 1215 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 TMEM39AQ9NV64 488 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 DNAI1Q9UI46 699 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
XRCC3-213ENST00000555451 PAXBP1Q9Y5B6 917 aa11.89□□□□□ -0.51
XRCC3-213ENST00000555451 TDRD15B5MCY1 1934 aaKnown RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 SCN1AP35498 2009 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 A0A0A6YYK5 440 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ANKRD62A6NC57 917 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 MEIS3P2A8K0S8 358 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 THAP12O43422 761 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 NBNO60934 754 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 CILPO75339 1184 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 TACC1O75410 805 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 WEE2P0C1S8 567 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 TMEM253P0C7T8 217 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ITGB8P26012 769 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 CASQ1P31415 396 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 SOX4Q06945 474 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ZNF569Q5MCW4 686 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 GSTCDQ8NEC7 633 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 TRIM58Q8NG06 486 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 CTNNBL1Q8WYA6 563 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ZNF592Q92610 1267 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ALS2CR12Q96Q35 445 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 LBHD1Q9BQE6 289 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 SDCBP2Q9H190 292 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ISCUQ9H1K1 167 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 PDCL3Q9H2J4 239 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ELAC1Q9H777 363 aaKnown RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 SMYD3Q9H7B4 428 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 ACP6Q9NPH0 428 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 PRDM5Q9NQX1 630 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 GDAP2Q9NXN4 497 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 TRIM10Q9UDY6 481 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 BARX2Q9UMQ3 279 aaPredicted RBP11.88□□□□□ -0.51
XRCC3-213ENST00000555451 TFR2Q9UP52 801 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 SNX9Q9Y5X1 595 aa11.88□□□□□ -0.51
XRCC3-213ENST00000555451 MACROD2A1Z1Q3 448 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 KPNA7A9QM74 516 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 PPEF2O14830 753 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 MED7O43513 233 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 ABL1P00519 1130 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 TIMP1P01033 207 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 CXCL10P02778 98 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 CYP1A1P04798 512 aaPredicted RBP11.87□□□□□ -0.51
XRCC3-213ENST00000555451 FAM163BP0C2L3 166 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 PAX3P23760 479 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 RPL9P32969 192 aaKnown RBP11.87□□□□□ -0.51
XRCC3-213ENST00000555451 RAP1GAPP47736 663 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 SCNN1GP51170 649 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 GALCP54803 685 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 FAM189BP81408 668 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 CLEC16AQ2KHT3 1053 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 DPH6Q7L8W6 267 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 RTN4RL1Q86UN2 441 aaPredicted RBP11.87□□□□□ -0.51
XRCC3-213ENST00000555451 PALB2Q86YC2 1186 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 TMEM130Q8N3G9 435 aa11.87□□□□□ -0.51
XRCC3-213ENST00000555451 RNF169Q8NCN4 708 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms