RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 DPH6Q7L8W6 267 aa12.44□□□□□ -0.42
SHMT2-212ENST00000554467 ABRAQ8N0Z2 381 aa12.44□□□□□ -0.42
SHMT2-212ENST00000554467 ZIC5Q96T25 663 aa12.44□□□□□ -0.42
SHMT2-212ENST00000554467 ZSWIM1Q9BR11 485 aa12.44□□□□□ -0.42
SHMT2-212ENST00000554467 TACO1Q9BSH4 297 aaKnown RBP12.44□□□□□ -0.42
SHMT2-212ENST00000554467 PDZD7Q9H5P4 517 aa12.44□□□□□ -0.42
SHMT2-212ENST00000554467 RPF1Q9H9Y2 349 aaKnown RBP12.44□□□□□ -0.42
SHMT2-212ENST00000554467 TMEM59LQ9UK28 342 aa12.44□□□□□ -0.42
SHMT2-212ENST00000554467 ATXN2Q99700 1313 aaKnown RBP12.44□□□□□ -0.42
SHMT2-212ENST00000554467 TTI1O43156 1089 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 ITGBL1O95965 494 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-212ENST00000554467 KRT14P02533 472 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 CYP1A2P05177 515 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 MAPK4P31152 587 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 MCOLN2Q8IZK6 566 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 AENQ8WTP8 325 aaKnown RBP12.43□□□□□ -0.42
SHMT2-212ENST00000554467 CISHQ9NSE2 258 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 GTF3C4Q9UKN8 822 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 HES2Q9Y543 173 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 PYGMP11217 842 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 CDR1P51861 262 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 HIC1Q14526 733 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 DGKDQ16760 1214 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 WDR72Q3MJ13 1102 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 TSEN2Q8NCE0 465 aaKnown RBP12.43□□□□□ -0.42
SHMT2-212ENST00000554467 TRIM51Q9BSJ1 452 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 DPH5Q9H2P9 285 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 RBM47A0AV96 593 aaKnown RBP12.43□□□□□ -0.42
SHMT2-212ENST00000554467 H0YHG0 523 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 ITGB3P05106 788 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 TMOD1P28289 359 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 CCNHP51946 323 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-212ENST00000554467 SPRED3Q2MJR0 410 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 RASAL3Q86YV0 1011 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 EXOC8Q8IYI6 725 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 ZDHHC14Q8IZN3 488 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 TNFSF13BQ9Y275 285 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 USTQ9Y2C2 406 aa12.43□□□□□ -0.42
SHMT2-212ENST00000554467 MROH7Q68CQ1 1323 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 SKAP2O75563 359 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-212ENST00000554467 TNNC2P02585 160 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 SSR1P43307 286 aaKnown RBP12.42□□□□□ -0.42
SHMT2-212ENST00000554467 FAM43BQ6ZT52 329 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-212ENST00000554467 C1orf127Q8N9H9 656 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 ZNF606Q8WXB4 792 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 TFAP2BQ92481 460 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 PRMT7Q9NVM4 692 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-212ENST00000554467 ADAM22Q9P0K1 906 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 HMGXB4Q9UGU5 601 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 SIX4Q9UIU6 781 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 ATP8B3O60423 1300 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 NDUFAB1O14561 156 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 HSF2BPO75031 334 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 BIRC2Q13490 618 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 MAATS1Q7Z4T9 603 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 RASGEF1CQ8N431 466 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 LINC01465Q8N7H1 131 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 C1orf131Q8NDD1 294 aaKnown RBP12.42□□□□□ -0.42
SHMT2-212ENST00000554467 KCNN1Q92952 543 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 ANKRD36BP1Q96IX9 119 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 OSMRQ99650 979 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 APOL6Q9BWW8 343 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 NIF3L1Q9GZT8 377 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 XYLT2Q9H1B5 865 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 SMYD3Q9H7B4 428 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 PPME1Q9Y570 386 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 TRIP12Q14669 1992 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-212ENST00000554467 CD19P15391 556 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 C11orf63Q6NUN7 778 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 TLDC1Q6P9B6 456 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 ZNF467Q7Z7K2 595 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-212ENST00000554467 IFT20Q8IY31 132 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 CCDC13Q8IYE1 715 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 KLHL11Q9NVR0 708 aa12.42□□□□□ -0.42
SHMT2-212ENST00000554467 MAGEB2O15479 319 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 ASAP2O43150 1006 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 TSPAN1O60635 241 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 TBXAS1P24557 533 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-212ENST00000554467 ASPAP45381 313 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 NOMO3P69849 1222 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 SKOR1P84550 965 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 SLC10A6Q3KNW5 377 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 CYP4A22Q5TCH4 519 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 TLK2Q86UE8 772 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 UBL4BQ8N7F7 174 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 C18orf8Q96DM3 657 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 NEUROG2Q9H2A3 272 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 TJP2Q9UDY2 1190 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 LAMA2P24043 3122 aaKnown RBP12.41□□□□□ -0.42
SHMT2-212ENST00000554467 EME2A4GXA9 379 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-212ENST00000554467 SLC15A5A6NIM6 579 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 DAPK3O43293 454 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 MYL3P08590 195 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 SMIM10L2AP0DMW4 78 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 SMIM10L2BP0DMW5 78 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 PEX5P50542 639 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 MAP2K5Q13163 448 aa12.41□□□□□ -0.42
SHMT2-212ENST00000554467 SGSM1Q2NKQ1 1148 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms