RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SYCP3Q8IZU3 236 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 C7orf25Q9BPX7 421 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 IKZF4Q9H2S9 585 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 CDH7Q9ULB5 785 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 PCDHA7Q9UN72 937 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 UBE4BO95155 1302 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 OR6C75A6NL08 312 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 PRRG1O14668 218 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 POLR2DO15514 142 aaKnown RBP11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 EXTL3O43909 919 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 LRG1P02750 347 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 CYP11A1P05108 521 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 ODC1P11926 461 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 TAF6P49848 677 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 ASIC1P78348 528 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 EHHADHQ08426 723 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 MYBPC2Q14324 1141 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 PABPC1LQ4VXU2 614 aaKnown RBP11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 OVOS1Q6IE37 1185 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 UNC13DQ70J99 1090 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 USP37Q86T82 979 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 EFCAB13Q8IY85 973 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 SENP8Q96LD8 212 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 FAM213AQ9BRX8 229 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 FGFBP2Q9BYJ0 223 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 CYP4F11Q9HBI6 524 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 DPP3Q9NY33 737 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 DSEQ9UL01 958 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 POLIQ9UNA4 740 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 INSL5Q9Y5Q6 135 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 SPTBN4Q9H254 2564 aa11.26□□□□□ -0.61
PTCD2P1-201ENST00000554393 MYO15AQ9UKN7 3530 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 PVALEFA0A1B0GWK0 134 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 PPEF2O14830 753 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 SPTLC1O15269 473 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 MICAL2O94851 1124 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 PRPF6O94906 941 aaKnown RBP11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 SEC24AO95486 1093 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 SRFP11831 508 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 CPB1P15086 417 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 PNPLA4P41247 253 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 ARPP19P56211 112 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 SNRPFP62306 86 aaKnown RBP11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 KRT85P78386 507 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 ADCY1Q08828 1119 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 HTR4Q13639 388 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 FAM26FQ5R3K3 315 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 ARMCX5Q6P1M9 558 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 MTSS1LQ765P7 747 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 EPM2AIP1Q7L775 607 aaPredicted RBP11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 GPD1LQ8N335 351 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 SLC44A3Q8N4M1 653 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 LEMD2Q8NC56 503 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 ZNF507Q8TCN5 953 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 FGF13Q92913 245 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 ZNF560Q96MR9 790 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 CBWD1Q9BRT8 395 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 SMOC2Q9H3U7 446 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 RBAKQ9NYW8 714 aaPredicted RBP11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 DNMT3BQ9UBC3 853 aaKnown RBP11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 HSFX1Q9UBD0 423 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 KMT2BQ9UMN6 2715 aaPredicted RBP11.25□□□□□ -0.61
PTCD2P1-201ENST00000554393 RHOP08100 348 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 SLFN14P0C7P3 912 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 PTPN2P17706 415 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 AVPR2P30518 371 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 NTHL1P78549 312 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 GPR17Q13304 367 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 PLD1Q13393 1074 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 SV2CQ496J9 727 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 RNF19BQ6ZMZ0 732 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 NPAS3Q8IXF0 933 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 CEP57L1Q8IYX8 460 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 ELMOD1Q8N336 334 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 TMEM130Q8N3G9 435 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 LRRC52Q8N7C0 313 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 ITFG1Q8TB96 612 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 CACTINQ8WUQ7 758 aaKnown RBP11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 SAAL1Q96ER3 474 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 KIAA1586Q9HCI6 787 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 SLC2A4RGQ9NR83 387 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 HCFC1R1Q9NWW0 138 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 GDE1Q9NZC3 331 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 WNT16Q9UBV4 365 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 ITGA11Q9UKX5 1188 aa11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 MRPS23Q9Y3D9 190 aaKnown RBP11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 TIMM13Q9Y5L4 95 aaPredicted RBP11.24□□□□□ -0.61
PTCD2P1-201ENST00000554393 NUP210Q8TEM1 1887 aaPredicted RBP11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 DENND4CQ5VZ89 1909 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 ZNF233A6NK53 670 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 KPNA7A9QM74 516 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 ZNF197O14709 1029 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 GFRA3O60609 400 aa11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 PDGFBP01127 241 aaPredicted RBP11.23□□□□□ -0.61
PTCD2P1-201ENST00000554393 MYL1P05976 194 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms