RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 AFF3P51826 1226 aaKnown RBP6.58□□□□□ -1.36
ATXN3-226ENST00000554350 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 UBE3AQ05086 875 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 G3BP1Q13283 466 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATXN3-226ENST00000554350 OS9Q13438 667 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-226ENST00000554350 AUHQ13825 339 aaKnown RBP6.58□□□□□ -1.36
ATXN3-226ENST00000554350 NONOQ15233 471 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATXN3-226ENST00000554350 ZNF528Q3MIS6 628 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 AASDHQ4L235 1098 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-226ENST00000554350 C19orf48Q6RUI8 117 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 SEPT14Q6ZU15 432 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 HS2ST1Q7LGA3 356 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 FAM129CQ86XR2 697 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 MAML2Q8IZL2 1156 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-226ENST00000554350 TMEM87AQ8NBN3 555 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 BORCS6Q96GS4 357 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 TCF25Q9BQ70 676 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 RIOK1Q9BRS2 568 aaKnown RBP6.58□□□□□ -1.36
ATXN3-226ENST00000554350 NT5C1AQ9BXI3 368 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 SEMA4GQ9NTN9 838 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 AP5S1Q9NUS5 200 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 PCDHA5Q9Y5H7 936 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 TAF6LQ9Y6J9 622 aa6.58□□□□□ -1.36
ATXN3-226ENST00000554350 PTPRCP08575 1304 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 HELZ2Q9BYK8 2649 aaKnown RBP6.57□□□□□ -1.36
ATXN3-226ENST00000554350 OTOL1A6NHN0 477 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-226ENST00000554350 B4DLN1 442 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 ENPP3O14638 875 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 ZZEF1O43149 2961 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 IGSF3O75054 1194 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 PRKCAP17252 672 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 GATMP50440 423 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 MRPL12P52815 198 aaKnown RBP6.57□□□□□ -1.36
ATXN3-226ENST00000554350 RARSP54136 660 aaKnown RBP6.57□□□□□ -1.36
ATXN3-226ENST00000554350 ARHGAP1Q07960 439 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 KIAA1841Q6NSI8 718 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 SLC30A10Q6XR72 485 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 CCDC149Q6ZUS6 474 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 C16orf86Q6ZW13 317 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 OTOP3Q7RTS5 596 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 FAM160B2Q86V87 743 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 LCORLQ8N3X6 602 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 PJA1Q8NG27 643 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 CHURC1Q8WUH1 139 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 RSAD2Q8WXG1 361 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 JMJD8Q96S16 334 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 GPR20Q99678 358 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 MKRN2Q9H000 416 aaKnown RBP6.57□□□□□ -1.36
ATXN3-226ENST00000554350 ARHGEF3Q9NR81 526 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 PRR13Q9NZ81 148 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 DLGAP2Q9P1A6 1054 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 NYAP2Q9P242 653 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 PUF60Q9UHX1 559 aaKnown RBP6.57□□□□□ -1.36
ATXN3-226ENST00000554350 FBXO4Q9UKT5 387 aa6.57□□□□□ -1.36
ATXN3-226ENST00000554350 NOP58Q9Y2X3 529 aaKnown RBP6.57□□□□□ -1.36
ATXN3-226ENST00000554350 LCTP09848 1927 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 HIDE1A8MVS5 230 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 ABLIM1O14639 778 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 PRKAB2O43741 272 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 CAND2O75155 1236 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 F2P00734 622 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 MPOP05164 745 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 MSL3P1P0C860 447 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 STAG3L1P0CL83 205 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 GLULP15104 373 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 MCM4P33991 863 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 ZNF165P49910 485 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 LAPTM5Q13571 262 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 KCNC3Q14003 757 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 UBXN2BQ14CS0 331 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 VMACQ2NL98 169 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 C20orf194Q5TEA3 1177 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 LAIR1Q6GTX8 287 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 DCLRE1AQ6PJP8 1040 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 TSSK4Q6SA08 328 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 RASGRP4Q8TDF6 673 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 NKD1Q969G9 470 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 HNRNPABQ99729 332 aaKnown RBP6.56□□□□□ -1.36
ATXN3-226ENST00000554350 CDADC1Q9BWV3 514 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 ARMT1Q9H993 441 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 IGSF9Q9P2J2 1179 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 IMPACTQ9P2X3 320 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 SUCOQ9UBS9 1254 aaKnown RBP6.56□□□□□ -1.36
ATXN3-226ENST00000554350 HCFC2Q9Y5Z7 792 aa6.56□□□□□ -1.36
ATXN3-226ENST00000554350 COL4A3Q01955 1670 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 BAZ2AQ9UIF9 1905 aaKnown RBP6.55□□□□□ -1.36
ATXN3-226ENST00000554350 LOC102724159A0A0B4J2E5 919 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 HAS3O00219 553 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 KCNK5O95279 499 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 RETP07949 1114 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 SMIM10L2AP0DMW4 78 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 SMIM10L2BP0DMW5 78 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 SLC1A4P43007 532 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 MVKQ03426 396 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 PWP2Q15269 919 aaKnown RBP6.55□□□□□ -1.36
ATXN3-226ENST00000554350 CSRP2Q16527 193 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 TNNI3KQ59H18 835 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 SLC9C2Q5TAH2 1124 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 C12orf60Q5U649 245 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms