RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 CACNG4Q9UBN1 327 aa13.9□□□□□ -0.18
XRCC3-206ENST00000554170 CA14Q9ULX7 337 aa13.9□□□□□ -0.18
XRCC3-206ENST00000554170 NUB1Q9Y5A7 615 aa13.9□□□□□ -0.18
XRCC3-206ENST00000554170 PCDHA5Q9Y5H7 936 aa13.9□□□□□ -0.18
XRCC3-206ENST00000554170 R4GN57 208 aa13.9□□□□□ -0.18
XRCC3-206ENST00000554170 PATJQ8NI35 1801 aa13.9□□□□□ -0.18
XRCC3-206ENST00000554170 F8W810 466 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 PDXKO00764 312 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 CYP2J2P51589 502 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 DSG1Q02413 1049 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 SOX4Q06945 474 aaPredicted RBP13.89□□□□□ -0.19
XRCC3-206ENST00000554170 ZBTB6Q15916 424 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 JADE1Q6IE81 842 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 ZC3H14Q6PJT7 736 aaKnown RBP13.89□□□□□ -0.19
XRCC3-206ENST00000554170 BRSK2Q8IWQ3 736 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 C12orf56Q8IXR9 622 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 KIAA2013Q8IYS2 634 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 GUF1Q8N442 669 aaKnown RBP13.89□□□□□ -0.19
XRCC3-206ENST00000554170 XXYLT1Q8NBI6 393 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 GPR152Q8TDT2 470 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 CACTINQ8WUQ7 758 aaKnown RBP13.89□□□□□ -0.19
XRCC3-206ENST00000554170 ZNF707Q96C28 371 aaPredicted RBP13.89□□□□□ -0.19
XRCC3-206ENST00000554170 RXFP1Q9HBX9 757 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 ARHGEF3Q9NR81 526 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 TUBGCP4Q9UGJ1 667 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 C2CD2Q9Y426 696 aa13.89□□□□□ -0.19
XRCC3-206ENST00000554170 MED19A0JLT2 244 aaPredicted RBP13.88□□□□□ -0.19
XRCC3-206ENST00000554170 EXOC3O60645 756 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 C1RP00736 705 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 DCNP07585 359 aaKnown RBP13.88□□□□□ -0.19
XRCC3-206ENST00000554170 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 LRPAP1P30533 357 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
XRCC3-206ENST00000554170 FAM171A1Q5VUB5 890 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 SPATA1Q5VX52 437 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 DGLUCYQ7Z3D6 616 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 RDH13Q8NBN7 331 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 GPR62Q9BZJ7 368 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 PLEKHA4Q9H4M7 779 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 PIDD1Q9HB75 910 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.88□□□□□ -0.19
XRCC3-206ENST00000554170 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.88□□□□□ -0.19
XRCC3-206ENST00000554170 DLGAP2Q9P1A6 1054 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 MAPK8IP1Q9UQF2 711 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 SIT1Q9Y3P8 196 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 ACACBO00763 2458 aa13.88□□□□□ -0.19
XRCC3-206ENST00000554170 ANHXE9PGG2 379 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 NFICP08651 508 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 SP9P0CG40 484 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 LAMP2P13473 410 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 PAX3P23760 479 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 MCM4P33991 863 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 CREMQ03060 361 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 STIM1Q13586 685 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 HTR4Q13639 388 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 MYBPC2Q14324 1141 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 SNRNP35Q16560 246 aaKnown RBP13.87□□□□□ -0.19
XRCC3-206ENST00000554170 PDXDC1Q6P996 788 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-206ENST00000554170 GET4Q7L5D6 327 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-206ENST00000554170 CBWD2Q8IUF1 395 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 GPR65Q8IYL9 337 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 ZSWIM2Q8NEG5 633 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 SPATA20Q8TB22 786 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 ERCC4Q92889 916 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-206ENST00000554170 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 TTPALQ9BTX7 342 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 SLC2A4RGQ9NR83 387 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 ZDHHC7Q9NXF8 308 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 TRAF3IP3Q9Y228 551 aa13.87□□□□□ -0.19
XRCC3-206ENST00000554170 R3HCC1Q9Y3T6 440 aaKnown RBP13.87□□□□□ -0.19
XRCC3-206ENST00000554170 NOTCH4Q99466 2003 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 VWA8A3KMH1 1905 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 TGM5O43548 720 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 NR3C1P04150 777 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 TMEM191BP0C7N4 346 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 RPL13P26373 211 aaKnown RBP13.86□□□□□ -0.19
XRCC3-206ENST00000554170 PPP1R2P41236 205 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 BRCC3P46736 316 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 TFAMQ00059 246 aaKnown RBP13.86□□□□□ -0.19
XRCC3-206ENST00000554170 PALB2Q86YC2 1186 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 SLC9A9Q8IVB4 645 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 C1orf210Q8IVY1 113 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 C3orf58Q8NDZ4 430 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 PJA1Q8NG27 643 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 ANKRD36BP1Q96IX9 119 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 TSG101Q99816 390 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 HINFPQ9BQA5 517 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 PRKD2Q9BZL6 878 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 PDE11AQ9HCR9 933 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 DPP3Q9NY33 737 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 FRMD4BQ9Y2L6 1034 aa13.86□□□□□ -0.19
XRCC3-206ENST00000554170 NUMBLQ9Y6R0 609 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms