RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TXNDC5Q8NBS9 432 aaKnown RBP6.03□□□□□ -1.44
SCFD1-209ENST00000553280 NLGN4YQ8NFZ3 816 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-209ENST00000553280 RABGGTAQ92696 567 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 TRIM63Q969Q1 353 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 GDF15Q99988 308 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 PACSIN1Q9BY11 444 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 EIF2AQ9BY44 585 aaKnown RBP6.03□□□□□ -1.44
SCFD1-209ENST00000553280 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 SLAMF7Q9NQ25 335 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 A1CFQ9NQ94 594 aaKnown RBP6.03□□□□□ -1.44
SCFD1-209ENST00000553280 FAM30AQ9NZY2 134 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 JKAMPQ9P055 326 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 GPR52Q9Y2T5 361 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 ZDHHC9Q9Y397 364 aa6.03□□□□□ -1.44
SCFD1-209ENST00000553280 TCRBV7S2A1N4TA0A589 114 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 CLCA1A8K7I4 914 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 CXorf49A8MYA2 514 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-209ENST00000553280 KIAA0391O15091 583 aaKnown RBP6.02□□□□□ -1.45
SCFD1-209ENST00000553280 PJA2O43164 708 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 SNRPA1P09661 255 aaKnown RBP6.02□□□□□ -1.45
SCFD1-209ENST00000553280 SLC6A4P31645 630 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 NPEPPSP55786 919 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 MXRA7P84157 204 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 PPFIA1Q13136 1202 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 PFKFB4Q16877 469 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 ZACNQ401N2 412 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 FAM26FQ5R3K3 315 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 LMBRD2Q68DH5 695 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-209ENST00000553280 UNC13DQ70J99 1090 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 RNF44Q7L0R7 432 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 ADGRE4PQ86SQ3 457 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 CACNA2D3Q8IZS8 1091 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 FANCBQ8NB91 859 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 CYP2W1Q8TAV3 490 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 SLC35B2Q8TB61 432 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 TBC1D20Q96BZ9 403 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 GPR35Q9HC97 309 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 IL23AQ9NPF7 189 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 SAGE1Q9NXZ1 904 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 C9orf78Q9NZ63 289 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-209ENST00000553280 NCDNQ9UBB6 729 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 MAN2B2Q9Y2E5 1009 aa6.02□□□□□ -1.45
SCFD1-209ENST00000553280 PNPLA7Q6ZV29 1317 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 A0A087WWL8 130 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 PYCARD-AS1I3L0S3 204 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 HOXA3O43365 443 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-209ENST00000553280 AMHP03971 560 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 ANXA1P04083 346 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 KRTAP10-2P60368 255 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 POU6F2P78424 691 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-209ENST00000553280 GALNT1Q10472 559 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-209ENST00000553280 ZNF365Q70YC5 407 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 DDX17Q92841 729 aaKnown RBP6.01□□□□□ -1.45
SCFD1-209ENST00000553280 MBD6Q96DN6 1003 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 BORCS6Q96GS4 357 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 RMDN3Q96TC7 470 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 HEPHQ9BQS7 1158 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 CHST8Q9H2A9 424 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 TM7SF3Q9NS93 570 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 SLC39A10Q9ULF5 831 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 NR2E1Q9Y466 385 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 PLEKHM1Q9Y4G2 1056 aa6.01□□□□□ -1.45
SCFD1-209ENST00000553280 UBE2QL1A1L167 161 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 MBD3L4A6NDZ8 208 aaPredicted RBP6□□□□□ -1.45
SCFD1-209ENST00000553280 MBD3L3A6NE82 208 aaPredicted RBP6□□□□□ -1.45
SCFD1-209ENST00000553280 K7ESM1 405 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 SLC26A4O43511 780 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 DNAJB5O75953 348 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 GNAI2P04899 355 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 IL1R1P14778 569 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 SLC11A2P49281 568 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 CLRN1P58418 232 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 FOXO1Q12778 655 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 GRM1Q13255 1194 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 RNF151Q2KHN1 245 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 ZNF529Q6P280 563 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 LVRNQ6Q4G3 990 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 MMS22LQ6ZRQ5 1243 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 RALYLQ86SE5 291 aaKnown RBP6□□□□□ -1.45
SCFD1-209ENST00000553280 ANKRD18AQ8IVF6 992 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 AOPEPQ8N6M6 819 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 DNAJC5GQ8N7S2 189 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 VGLL2Q8N8G2 317 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 TEX19Q8NA77 164 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 PCSK9Q8NBP7 692 aaKnown RBP6□□□□□ -1.45
SCFD1-209ENST00000553280 OR56A3Q8NH54 315 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 TRAPPC12Q8WVT3 735 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 IPCEF1Q8WWN9 437 aaPredicted RBP6□□□□□ -1.45
SCFD1-209ENST00000553280 CFHR4Q92496 578 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 MUL1Q969V5 352 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 GCC1Q96CN9 775 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 C18orf8Q96DM3 657 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 LTV1Q96GA3 475 aaPredicted RBP6□□□□□ -1.45
SCFD1-209ENST00000553280 LCORQ96JN0 433 aaPredicted RBP6□□□□□ -1.45
SCFD1-209ENST00000553280 TMEM120AQ9BXJ8 343 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 OBP2BQ9NPH6 170 aa6□□□□□ -1.45
SCFD1-209ENST00000553280 MROH6A6NGR9 719 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 TBKBP1A7MCY6 615 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 B5MCH6 92 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 NPC1O15118 1278 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms