RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 GOLGA6L22H0YM25 854 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 I3L4J1 428 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 PPEF2O14830 753 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 CALUO43852 315 aaPredicted RBP9.9□□□□□ -0.82
CDK4-211ENST00000552254 EXOC3O60645 756 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 NR3C1P04150 777 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 URODP06132 367 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 CNPP09543 421 aaKnown RBP9.9□□□□□ -0.82
CDK4-211ENST00000552254 HOXB8P17481 243 aaPredicted RBP9.9□□□□□ -0.82
CDK4-211ENST00000552254 BMP6P22004 513 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 RFX1P22670 979 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 BRCC3P46736 316 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 GLUD2P49448 558 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 CYP24A1Q07973 514 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 ELAVL2Q12926 359 aaKnown RBP9.9□□□□□ -0.82
CDK4-211ENST00000552254 MORC3Q14149 939 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 MYBPC2Q14324 1141 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 SURF1Q15526 300 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 NFIL3Q16649 462 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 ZCWPW2Q504Y3 356 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 FAM171A1Q5VUB5 890 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 C9orf57Q5W0N0 161 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 TMC5Q6UXY8 1006 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 GPR65Q8IYL9 337 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 SLC22A17Q8WUG5 538 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 KLHL5Q96PQ7 755 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 CLSTN2Q9H4D0 955 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 MRPL17Q9NRX2 175 aaKnown RBP9.9□□□□□ -0.82
CDK4-211ENST00000552254 DPP3Q9NY33 737 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 KIAA1468Q9P260 1216 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 SSX2IPQ9Y2D8 614 aa9.9□□□□□ -0.82
CDK4-211ENST00000552254 DENND4AQ7Z401 1863 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 MYO10Q9HD67 2058 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 PTPRJQ12913 1337 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 C2CD4DB7Z1M9 353 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 TULP1O00294 542 aaPredicted RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 BIN1O00499 593 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 PIRO00625 290 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 TRAPPC3O43617 180 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 LMNAP02545 664 aaKnown RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 FGFR3P22607 806 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 KLRC2P26717 231 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 CASP4P49662 377 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 TFAMQ00059 246 aaKnown RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 PSMD6Q15008 389 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 RTP2Q5QGT7 225 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 CENPPQ6IPU0 288 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 KIAA1841Q6NSI8 718 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 CES5AQ6NT32 575 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 CEP57Q86XR8 500 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 GLYCTKQ8IVS8 523 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 GPT2Q8TD30 523 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 CACTINQ8WUQ7 758 aaKnown RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 RIN2Q8WYP3 895 aaPredicted RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 FAM84AQ96KN4 292 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 SUSD3Q96L08 255 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 TTPALQ9BTX7 342 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 ADAM7Q9H2U9 754 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 SMOC2Q9H3U7 446 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 RXFP1Q9HBX9 757 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 INTS13Q9NVM9 706 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 RALYQ9UKM9 306 aaKnown RBP9.89□□□□□ -0.83
CDK4-211ENST00000552254 NUB1Q9Y5A7 615 aa9.89□□□□□ -0.83
CDK4-211ENST00000552254 SPDYE4A6NLX3 237 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 PPP1R3GB7ZBB8 358 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 M0QZQ0 153 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 STK25O00506 426 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 MAPK13O15264 365 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 TEX28O15482 410 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 ITGB3P05106 788 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 SPATA31D3P0C874 917 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 RPL17P18621 184 aaKnown RBP9.88□□□□□ -0.83
CDK4-211ENST00000552254 NR2F2P24468 414 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 RPL13P26373 211 aaKnown RBP9.88□□□□□ -0.83
CDK4-211ENST00000552254 TKTP29401 623 aaKnown RBP9.88□□□□□ -0.83
CDK4-211ENST00000552254 MCM4P33991 863 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 AARSP49588 968 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDK4-211ENST00000552254 CLCN4P51793 760 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 LILRA4P59901 499 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 ADAM9Q13443 819 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 ANGPT1Q15389 498 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 EDRF1Q3B7T1 1238 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 LMBRD2Q68DH5 695 aaPredicted RBP9.88□□□□□ -0.83
CDK4-211ENST00000552254 ANKRD40Q6AI12 368 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 SCARA3Q6AZY7 606 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 PRSS55Q6UWB4 352 aaPredicted RBP9.88□□□□□ -0.83
CDK4-211ENST00000552254 SPATA31D4Q6ZUB0 917 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 WDR49Q8IV35 697 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 C1orf127Q8N9H9 656 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 TRIML1Q8N9V2 468 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 OR5B17Q8NGF7 314 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 CXorf38Q8TB03 319 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 LNX1Q8TBB1 728 aaPredicted RBP9.88□□□□□ -0.83
CDK4-211ENST00000552254 PLEKHO2Q8TD55 490 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 PARD3BQ8TEW8 1205 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 ZNF516Q92618 1163 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms