RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PLCB1Q9NQ66 1216 aa5.99□□□□□ -1.45
LIMA1-205ENST00000550592 SNAPC4Q5SXM2 1469 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 ABHD14A-ACY1A0A1B0GW23 586 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 F8W8V4 182 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 IFRD1O00458 451 aaPredicted RBP5.98□□□□□ -1.45
LIMA1-205ENST00000550592 PRSS23O95084 383 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 CHEK2O96017 543 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 CKBP12277 381 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 HK1P19367 917 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 TNFSF4P23510 183 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 STT3AP46977 705 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 CHN2P52757 468 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 MXRA7P84157 204 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 HHEXQ03014 270 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 FAM209BQ5JX69 171 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 DGKKQ5KSL6 1271 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 IZUMO3Q5VZ72 239 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 METRNLQ641Q3 311 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 MAMDC4Q6UXC1 1216 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 SYT12Q8IV01 421 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 EXOC8Q8IYI6 725 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 RNF152Q8N8N0 203 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 TMIEQ8NEW7 156 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 DNERQ8NFT8 737 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 NUP133Q8WUM0 1156 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 ATXN2LQ8WWM7 1075 aaKnown RBP5.98□□□□□ -1.45
LIMA1-205ENST00000550592 BRI3BPQ8WY22 251 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 KLHL32Q96NJ5 620 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 ZNF518BQ9C0D4 1074 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 SACM1LQ9NTJ5 587 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 SRRDQ9UH36 339 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 PLEKHM1Q9Y4G2 1056 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 PAXBP1Q9Y5B6 917 aa5.98□□□□□ -1.45
LIMA1-205ENST00000550592 TDRD9Q8NDG6 1382 aaKnown RBP5.97□□□□□ -1.45
LIMA1-205ENST00000550592 POM121BA6NF01 834 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 ZNF785A8K8V0 405 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 ITGB1P05556 798 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 TSHRP16473 764 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 COMTP21964 271 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 GCSHP23434 173 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 POU6F2P78424 691 aaPredicted RBP5.97□□□□□ -1.45
LIMA1-205ENST00000550592 HTRA4P83105 476 aaPredicted RBP5.97□□□□□ -1.45
LIMA1-205ENST00000550592 SLC13A2Q13183 592 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 CTBP1Q13363 440 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 CRB2Q5IJ48 1285 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 C3orf38Q5JPI3 329 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 SPOCD1Q6ZMY3 1216 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 SGMS1Q86VZ5 419 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 MICU3Q86XE3 530 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 MB21D1Q8N884 522 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 Q8TCH9 128 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 BRIP1Q9BX63 1249 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 KRTAP9-2Q9BYQ4 174 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 SIK2Q9H0K1 926 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 RGS17Q9UGC6 210 aaPredicted RBP5.97□□□□□ -1.45
LIMA1-205ENST00000550592 AGAP1Q9UPQ3 857 aa5.97□□□□□ -1.45
LIMA1-205ENST00000550592 TSPOAP1O95153 1857 aa5.96□□□□□ -1.45
LIMA1-205ENST00000550592 TOP2BQ02880 1626 aa5.96□□□□□ -1.45
LIMA1-205ENST00000550592 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 E9PLN8 166 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 NCK2O43639 380 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 FGF18O76093 207 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 UNC5CO95185 931 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 ITGB3P05106 788 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 PARP1P09874 1014 aaKnown RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 FDXRP22570 491 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 SLC11A2P49281 568 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 ZNF135P52742 658 aaPredicted RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 PTTG1IPP53801 180 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 RPS16P62249 146 aaKnown RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 SLFN5Q08AF3 891 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 RAB32Q13637 225 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 KRT72Q14CN4 511 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 SLC44A4Q53GD3 710 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 NOMO2Q5JPE7 1267 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 FAM102AQ5T9C2 384 aaPredicted RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 LMBRD2Q68DH5 695 aaPredicted RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 SKAP1Q86WV1 359 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 CERS3Q8IU89 383 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 ENAHQ8N8S7 591 aaPredicted RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 PCSK9Q8NBP7 692 aaKnown RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 SLC17A8Q8NDX2 589 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 MNTQ99583 582 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 VKORC1Q9BQB6 163 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 POLR3GLQ9BT43 218 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 SELENOOQ9BVL4 669 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 IMPG2Q9BZV3 1241 aa5.96□□□□□ -1.46
LIMA1-205ENST00000550592 TINAGL1Q9GZM7 467 aaPredicted RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 MAGI1Q96QZ7 1491 aaPredicted RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 TARBP1Q13395 1621 aaKnown RBP5.96□□□□□ -1.46
LIMA1-205ENST00000550592 A0A087WWL8 130 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 KLRG2A4D1S0 409 aaPredicted RBP5.95□□□□□ -1.46
LIMA1-205ENST00000550592 CAPN14A8MX76 684 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 GOLGA6L6A8MZA4 724 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 LEFTY2O00292 366 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 CYP27B1O15528 508 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 ZNF623O75123 536 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 GRPP07492 148 aa5.95□□□□□ -1.46
LIMA1-205ENST00000550592 PIM1P11309 404 aaPredicted RBP5.95□□□□□ -1.46
LIMA1-205ENST00000550592 AMOTQ4VCS5 1084 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms