RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 SLC7A3Q8WY07 619 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 ZNF578Q96N58 590 aaPredicted RBP11.65□□□□□ -0.54
TROAP-209ENST00000549275 JPH2Q9BR39 696 aaPredicted RBP11.65□□□□□ -0.54
TROAP-209ENST00000549275 EIF2AQ9BY44 585 aaKnown RBP11.65□□□□□ -0.54
TROAP-209ENST00000549275 LRRC3Q9BY71 257 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 DPH1Q9BZG8 443 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 EBF3Q9H4W6 596 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 GAREM1Q9H706 876 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 HES2Q9Y543 173 aa11.65□□□□□ -0.54
TROAP-209ENST00000549275 CASTOR2A6NHX0 329 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 TRAPPC3O43617 180 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 CILPO75339 1184 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 C1SP09871 688 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 MATKP42679 507 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 MRPS21P82921 87 aaKnown RBP11.64□□□□□ -0.55
TROAP-209ENST00000549275 PLD1Q13393 1074 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 PDGFRLQ15198 375 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 NOTUMQ6P988 496 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 GPIHBP1Q8IV16 184 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 DHX40Q8IX18 779 aaKnown RBP11.64□□□□□ -0.55
TROAP-209ENST00000549275 CACTIN-AS1Q8N1I8 211 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 EXD3Q8N9H8 876 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 RRP36Q96EU6 259 aaKnown RBP11.64□□□□□ -0.55
TROAP-209ENST00000549275 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
TROAP-209ENST00000549275 HIC2Q96JB3 615 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 TRIM6Q9C030 488 aaPredicted RBP11.64□□□□□ -0.55
TROAP-209ENST00000549275 ZMYM5Q9UJ78 669 aa11.64□□□□□ -0.55
TROAP-209ENST00000549275 SPTBN1Q01082 2364 aaKnown RBP11.63□□□□□ -0.55
TROAP-209ENST00000549275 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
TROAP-209ENST00000549275 K7ENP7 123 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 ZNF213O14771 459 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 GRK6P43250 576 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 AFMP43652 599 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 INHBCP55103 352 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 PRKCEQ02156 737 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 CYP4A11Q02928 519 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 PTH1RQ03431 593 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
TROAP-209ENST00000549275 CCDC157Q569K6 752 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 WDR45BQ5MNZ6 344 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 STXBP5Q5T5C0 1151 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 GPR158Q5T848 1215 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 INO80CQ6PI98 192 aaPredicted RBP11.63□□□□□ -0.55
TROAP-209ENST00000549275 TMEM92Q6UXU6 159 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 SLC41A1Q8IVJ1 513 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 KSR1Q8IVT5 923 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 RGL4Q8IZJ4 473 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 CPA6Q8N4T0 437 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 TRIML1Q8N9V2 468 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 ZNF419Q96HQ0 510 aaPredicted RBP11.63□□□□□ -0.55
TROAP-209ENST00000549275 SEMA3CQ99985 751 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
TROAP-209ENST00000549275 CACNG4Q9UBN1 327 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 SEC63Q9UGP8 760 aaKnown RBP11.63□□□□□ -0.55
TROAP-209ENST00000549275 AFF4Q9UHB7 1163 aaKnown RBP11.63□□□□□ -0.55
TROAP-209ENST00000549275 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.63□□□□□ -0.55
TROAP-209ENST00000549275 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
TROAP-209ENST00000549275 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 PLXND1Q9Y4D7 1925 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 A0A1B0GTW7 788 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 ERLIN2O94905 339 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 PRAMEF12O95522 483 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 PRKCBP05771 671 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 NFKB2Q00653 900 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 UBE2SQ16763 222 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 KIAA1614Q5VZ46 1190 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 DEFB119Q8N690 84 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 KCNE4Q8WWG9 221 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 FOXJ1Q92949 421 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 HSPA12BQ96MM6 686 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 ATXN3LQ9H3M9 355 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 TASP1Q9H6P5 420 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 IL21RQ9HBE5 538 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 FNDC3AQ9Y2H6 1198 aaKnown RBP11.62□□□□□ -0.55
TROAP-209ENST00000549275 NFE2L3Q9Y4A8 694 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 SAMM50Q9Y512 469 aa11.62□□□□□ -0.55
TROAP-209ENST00000549275 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 WDR64B1ANS9 1081 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 H7C4K7 107 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 KLK10O43240 276 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 ZNF217O75362 1048 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 FOSP01100 380 aaPredicted RBP11.61□□□□□ -0.55
TROAP-209ENST00000549275 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
TROAP-209ENST00000549275 HNRNPLP14866 589 aaKnown RBP eCLIP11.61□□□□□ -0.55
TROAP-209ENST00000549275 ITGB6P18564 788 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 AKAP5P24588 427 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.55
TROAP-209ENST00000549275 TKTP29401 623 aaKnown RBP11.61□□□□□ -0.55
TROAP-209ENST00000549275 FOXK1P85037 733 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 SEC23AQ15436 765 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 INAVAQ3KP66 663 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 EOGTQ5NDL2 527 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 CC2D1AQ6P1N0 951 aaPredicted RBP11.61□□□□□ -0.55
TROAP-209ENST00000549275 SIRT2Q8IXJ6 389 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 PGBD3Q8N328 593 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 CCDC33Q8N5R6 958 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 PIBF1Q8WXW3 757 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms