RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 MAGEA9P43362 315 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 ARHGAP8P85298 464 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 PSMD2Q13200 908 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 RTP2Q5QGT7 225 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 EPM2AIP1Q7L775 607 aaPredicted RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 SYCP3Q8IZU3 236 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 FMR1NBQ8N0W7 255 aaPredicted RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 ATRIPQ8WXE1 791 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 CCDC34Q96HJ3 373 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 ZMAT2Q96NC0 199 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 TSPAN18Q96SJ8 248 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 RPF1Q9H9Y2 349 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 SLC38A7Q9NVC3 462 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 ZSCAN32Q9NX65 697 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 CPSF3Q9UKF6 684 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 AGO2Q9UKV8 859 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 SMG5Q9UPR3 1016 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 ATRXP46100 2492 aa17.07■□□□□ 0.32
CHMP1A-206ENST00000549139 TTC26A0AVF1 554 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 TISP43B9A030 160 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 LDHAP00338 332 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 HNRNPA1P09651 372 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 CD72P21854 359 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 GARTP22102 1010 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 ADSSP30520 456 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 TNFSF9P41273 254 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 CREMQ03060 361 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 LMNB2Q03252 620 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 FZD5Q13467 585 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 HSP90AA2PQ14568 343 aaPredicted RBP17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 UBXN2BQ14CS0 331 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 PRSS55Q6UWB4 352 aaPredicted RBP17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 MTSS1LQ765P7 747 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 CD302Q8IX05 232 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 GLIS3Q8NEA6 775 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 ENGASEQ8NFI3 743 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 ITFG1Q8TB96 612 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 POMGNT1Q8WZA1 660 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 UROC1Q96N76 676 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 CLSTN3Q9BQT9 956 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 IKZF4Q9H2S9 585 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 PRMT8Q9NR22 394 aaPredicted RBP17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 FAM208BQ5VWN6 2430 aa17.06■□□□□ 0.32
CHMP1A-206ENST00000549139 UBE4BO95155 1302 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 CASTOR2A6NHX0 329 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 SHISA7A6NL88 538 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 CXCL8P10145 99 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 HOXA9P31269 272 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 PFKPQ01813 784 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 KMT5BQ4FZB7 885 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 RABGGTAQ92696 567 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 DDX27Q96GQ7 796 aaKnown RBP17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 PAAF1Q9BRP4 392 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 RTKNQ9BST9 563 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 SLC39A2Q9NP94 309 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 PARD6AQ9NPB6 346 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 CACNG4Q9UBN1 327 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 VWA8A3KMH1 1905 aa17.05■□□□□ 0.32
CHMP1A-206ENST00000549139 DCDC2BA2VCK2 349 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 LACTBL1A8MY62 500 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 TMEM189-UBE2V1I3L0A0 370 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 KIAA0391O15091 583 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 TBC1D4O60343 1298 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 TADA2AO75478 443 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 C8AP07357 584 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 POU2F2P09086 479 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 TARSP26639 723 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 HOXD13P35453 343 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 RPS9P46781 194 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 ACOT2P49753 483 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 SNRPFP62306 86 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 FAM160A1Q05DH4 1040 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 PPP2R3AQ06190 1150 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 SOX4Q06945 474 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 DPYDQ12882 1025 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 ZBTB6Q15916 424 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 ENOX2Q16206 610 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 UPP1Q16831 310 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 ZBTB41Q5SVQ8 909 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 TSSK4Q6SA08 328 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 CRELD2Q6UXH1 353 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 LNX1Q8TBB1 728 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 SCFD1Q8WVM8 642 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 PIK3R5Q8WYR1 880 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 CCDC47Q96A33 483 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 TIGD1Q96MW7 591 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 EXOC1Q9NV70 894 aa17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 CDV3Q9UKY7 258 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-206ENST00000549139 BAHCC1Q9P281 2608 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 CCL16O15467 120 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 ADAM12O43184 909 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 ADRB1P08588 477 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 PRR29P0C7W0 189 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 TDGF1P13385 188 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 CYP3A5P20815 502 aa17.03■□□□□ 0.32
CHMP1A-206ENST00000549139 RPL9P32969 192 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms