RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 ADCY8P40145 1251 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 BCAR1P56945 870 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 ANTXR2P58335 489 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 CD83Q01151 205 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 CAP1Q01518 475 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 SMAD4Q13485 552 aaKnown RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 STILQ15468 1287 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 TARBP2Q15633 366 aaKnown RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 KRTAP15-1Q3LI76 137 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 AMOTQ4VCS5 1084 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 RRP12Q5JTH9 1297 aaKnown RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 MBNL2Q5VZF2 373 aaKnown RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 IGFL4Q6B9Z1 124 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 CXorf57Q6NSI4 855 aaKnown RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 Q6ZUG5 572 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 GAREM2Q75VX8 874 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 BRINP3Q76B58 766 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 UBE3BQ7Z3V4 1068 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 CATIPQ7Z7H3 387 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 DNAJC10Q8IXB1 793 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 BCL6BQ8N143 479 aaPredicted RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 PPM1NQ8N819 430 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 KCNH5Q8NCM2 988 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 CHST13Q8NET6 341 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 LINS1Q8NG48 757 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 OR5AN1Q8NGI8 311 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 RAX2Q96IS3 184 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 LRGUKQ96M69 825 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 AIFM3Q96NN9 605 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 NUP88Q99567 741 aaPredicted RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 FDXACB1Q9BRP7 624 aaPredicted RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 SOX7Q9BT81 388 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 C11orf84Q9BUA3 381 aaPredicted RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 ISCA1Q9BUE6 129 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 HAPLN2Q9GZV7 340 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 CHMP4BQ9H444 224 aaKnown RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 TTC12Q9H892 705 aaPredicted RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 IFT122Q9HBG6 1241 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 PIH1D3Q9NQM4 214 aaKnown RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 C9orf78Q9NZ63 289 aaPredicted RBP2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 USP18Q9UMW8 372 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 LIMCH1Q9UPQ0 1083 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 CDY2AQ9Y6F7 541 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 LAMB4A4D0S4 1761 aa2.77□□□□□ -1.97
DEPDC4-206ENST00000549100 MAST3O60307 1309 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 NEDD4P46934 1319 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 TTC41PQ6P2S7 1318 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 STX6O43752 255 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 OFD1O75665 1012 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 SEC24DO94855 1032 aaPredicted RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 REC8O95072 547 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 HSP90AA1P07900 732 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 MTHFD2P13995 350 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 PFKLP17858 780 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 ATP5JP18859 108 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 CYP2C19P33261 490 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 SLC5A3P53794 718 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 MLLT6P55198 1093 aaPredicted RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 ADKP55263 362 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 GUCY1B3Q02153 619 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 KIF23Q02241 960 aaPredicted RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 LRMPQ12912 555 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 G3BP1Q13283 466 aaKnown RBP eCLIP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 OS9Q13438 667 aaPredicted RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 SPIDRQ14159 915 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 ZNF267Q14586 743 aaPredicted RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 CAMK4Q16566 473 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 C1orf141Q5JVX7 400 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 PRR31Q5SQ13 230 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 B3GNT9Q6UX72 402 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 C11orf57Q6ZUT1 292 aaPredicted RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 CYB5R4Q7L1T6 521 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 IFNL2Q8IZJ0 200 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 CNTROBQ8N137 903 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 LINC00482Q8N8I6 264 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 CDYL2Q8N8U2 506 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 KYQ8NBH2 561 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 NSUN7Q8NE18 718 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 OR14C36Q8NHC7 312 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 GAB3Q8WWW8 586 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 ZCCHC14Q8WYQ9 949 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 PIGBQ92521 554 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 RPGRQ92834 1020 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 ZBTB8AQ96BR9 441 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 TIFAQ96CG3 184 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 EVI5LQ96CN4 794 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 CLIP3Q96DZ5 547 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 NAP1L5Q96NT1 182 aaPredicted RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 NOL10Q9BSC4 688 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 ACE2Q9BYF1 805 aaPredicted RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 GTPBP4Q9BZE4 634 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 TSPY26PQ9H489 355 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 DMRT3Q9NQL9 472 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 GEMIN8Q9NWZ8 242 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 OBP2AQ9NY56 170 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 KCMF1Q9P0J7 381 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 FTSJ1Q9UET6 329 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 DDX20Q9UHI6 824 aaKnown RBP2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 USP25Q9UHP3 1055 aa2.76□□□□□ -1.97
DEPDC4-206ENST00000549100 CROTQ9UKG9 612 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms