RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SENP8Q96LD8 212 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 ZNF512Q96ME7 567 aaPredicted RBP18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 ZSWIM3Q96MP5 696 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 CLIC6Q96NY7 704 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 LRRC3Q9BY71 257 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 C2CD2Q9Y426 696 aa18.86■□□□□ 0.61
CHMP1A-205ENST00000548650 MYMKA6NI61 221 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 PIRO00625 290 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 SP9P0CG40 484 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 MYL4P12829 197 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 GJA1P17302 382 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 TARSP26639 723 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 PLD1Q13393 1074 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 MYBPC2Q14324 1141 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 SLFN12LQ6IEE8 588 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 ZNF720Q7Z2F6 126 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 ADSSL1Q8N142 457 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 OR10T2Q8NGX3 314 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 SMARCD2Q92925 531 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 TMEM209Q96SK2 561 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 STRA6Q9BX79 667 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 ASB7Q9H672 318 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 ZFP14Q9HCL3 533 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 HEBP1Q9NRV9 189 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 CCDC39Q9UFE4 941 aa18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 AGO2Q9UKV8 859 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 MORC2Q9Y6X9 1032 aaPredicted RBP18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 KIF26AQ9ULI4 1882 aaPredicted RBP18.85■□□□□ 0.61
CHMP1A-205ENST00000548650 CYP11A1P05108 521 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 PAX3P23760 479 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 ADSSP30520 456 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 DUSP4Q13115 394 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 TEAD2Q15562 447 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 CENPPQ6IPU0 288 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 CRELD2Q6UXH1 353 aaPredicted RBP18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 VITQ6UXI7 678 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 EFCAB13Q8IY85 973 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 ZSCAN18Q8TBC5 510 aaPredicted RBP18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 DNAJC19Q96DA6 116 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 BCO2Q9BYV7 579 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 TRPV4Q9HBA0 871 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 SEL1LQ9UBV2 794 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 OBSL1O75147 1896 aa18.84■□□□□ 0.61
CHMP1A-205ENST00000548650 GPR179Q6PRD1 2367 aa18.83■□□□□ 0.61
CHMP1A-205ENST00000548650 DENND4CQ5VZ89 1909 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 FAM170BA6NMN3 283 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 TXLNAP40222 546 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 VIPR2P41587 438 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 MAGEA9P43362 315 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 POU5F1Q01860 360 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 CEBPZQ03701 1054 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 KCNA1Q09470 495 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 RRAGBQ5VZM2 374 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 ZC3H14Q6PJT7 736 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 ATAD1Q8NBU5 361 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 CLDN23Q96B33 292 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 INTS4Q96HW7 963 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 USP28Q96RU2 1077 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 TRMT61BQ9BVS5 477 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 SEMA4AQ9H3S1 761 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 MTMR6Q9Y217 621 aa18.83■□□□□ 0.6
CHMP1A-205ENST00000548650 WDR87Q6ZQQ6 2873 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 A0A087X0B3 334 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 SOAT2O75908 522 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 LMNAP02545 664 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 GAP43P17677 238 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 PSMC3P17980 439 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 CASP5P51878 434 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 WNT7BP56706 349 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 DEPDC1BQ8WUY9 529 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 POMGNT1Q8WZA1 660 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 FGFBP2Q9BYJ0 223 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 BRD9Q9H8M2 597 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 MRPL44Q9H9J2 332 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 ZNF334Q9HCZ1 680 aaPredicted RBP18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 OLFML3Q9NRN5 406 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 SPATA6Q9NWH7 488 aaPredicted RBP18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 SLC27A5Q9Y2P5 690 aa18.82■□□□□ 0.6
CHMP1A-205ENST00000548650 A0A1W2PRU2 124 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 FRMD3A2A2Y4 597 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 RPS9P46781 194 aaKnown RBP18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 TAF6P49848 677 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 EPHB3P54753 998 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 FZD5Q13467 585 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 STXBP5Q5T5C0 1151 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 L1TD1Q5T7N2 865 aaKnown RBP18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 ZNF852Q6ZMS4 543 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 SV2BQ7L1I2 683 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 ZNF687Q8N1G0 1237 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 PSMG2Q969U7 264 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 RSPRY1Q96DX4 576 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 MKNK1Q9BUB5 465 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 ZCWPW1Q9H0M4 648 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 SLITRK6Q9H5Y7 841 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 TRPV5Q9NQA5 729 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 DPP3Q9NY33 737 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 TBC1D7Q9P0N9 293 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 HSFX1Q9UBD0 423 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 FBXO4Q9UKT5 387 aa18.81■□□□□ 0.6
CHMP1A-205ENST00000548650 ARNTLO00327 626 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms