RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 SARAFQ96BY9 339 aa4.32□□□□□ -1.72
RAB3IP-209ENST00000547055 LRIG1Q96JA1 1093 aa4.32□□□□□ -1.72
RAB3IP-209ENST00000547055 TEKT5Q96M29 485 aa4.32□□□□□ -1.72
RAB3IP-209ENST00000547055 SMOQ99835 787 aa4.32□□□□□ -1.72
RAB3IP-209ENST00000547055 MAN1C1Q9NR34 630 aa4.32□□□□□ -1.72
RAB3IP-209ENST00000547055 CALCOCO1Q9P1Z2 691 aa4.32□□□□□ -1.72
RAB3IP-209ENST00000547055 SHTN1A0MZ66 631 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 E7ENX8 843 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 ANXA1P04083 346 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 ELFN1P0C7U0 828 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 WT1P19544 449 aaPredicted RBP4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 ABCG1P45844 678 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 GUCY2FP51841 1108 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 POU6F2P78424 691 aaPredicted RBP4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 TAP2Q03519 686 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 ITIH3Q06033 890 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 MTMR1Q13613 665 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 PCBP2Q15366 365 aaKnown RBP eCLIP4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 TXNRD1Q16881 649 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 UAP1L1Q3KQV9 507 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 TTC7BQ86TV6 843 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 PNMA8AQ86V59 439 aaPredicted RBP4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 SH2D3CQ8N5H7 860 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 TRIB1Q96RU8 372 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 DMRTA2Q96SC8 542 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 VRK1Q99986 396 aaPredicted RBP4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 CCDC8Q9H0W5 538 aaPredicted RBP4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 KMT5AQ9NQR1 393 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 ST3GAL5Q9UNP4 418 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 NR2E3Q9Y5X4 410 aa4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 POLR2AP24928 1970 aaKnown RBP4.31□□□□□ -1.72
RAB3IP-209ENST00000547055 LINC00473A8K010 186 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 E9PLN8 166 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 POLRMTO00411 1230 aaKnown RBP4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 MALP21145 153 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 NPTX2P47972 431 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 HNRNPMP52272 730 aaKnown RBP eCLIP4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 PROK1P58294 105 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 NXPH1P58417 271 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 SRSF4Q08170 494 aaKnown RBP4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 FAM153CQ494X1 144 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 KHDC1Q4VXA5 237 aaKnown RBP4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 CCDC93Q567U6 631 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 RNF187Q5TA31 235 aaPredicted RBP4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 SLC30A10Q6XR72 485 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 TMPRSS9Q7Z410 1059 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 AMIGO2Q86SJ2 522 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 PDSS2Q86YH6 399 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 FBXO41Q8TF61 875 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 MTMR8Q96EF0 704 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 VKORC1Q9BQB6 163 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 KLC4Q9NSK0 619 aa4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 CFAP20Q9Y6A4 193 aaKnown RBP4.3□□□□□ -1.72
RAB3IP-209ENST00000547055 A0A0B4J269 797 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 DNAJC9-AS1A6NH13 148 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 F5H697 171 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 F2RL2O00254 374 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 GNAI3P08754 354 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 SOX10P56693 466 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 PSMC1P62191 440 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 GNAI1P63096 354 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 KRT85P78386 507 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 EXOSC10Q01780 885 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 SNAPC2Q13487 334 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 TUBB3Q13509 450 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 EFCAB2Q5VUJ9 269 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 PTF1AQ7RTS3 328 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 FAM9AQ8IZU1 332 aaPredicted RBP4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 POC1BQ8TC44 478 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 NSUN6Q8TEA1 469 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 SCAMP4Q969E2 229 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 HAPLN3Q96S86 360 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 SLC29A3Q9BZD2 475 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 BRD9Q9H8M2 597 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 GNL3LQ9NVN8 582 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 SIDT1Q9NXL6 827 aaKnown RBP4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 SERPINB13Q9UIV8 391 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 WNT6Q9Y6F9 365 aa4.29□□□□□ -1.72
RAB3IP-209ENST00000547055 WDR27A2RRH5 827 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 MANSC4A6NHS7 340 aaPredicted RBP4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 CGB1A6NKQ9 187 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 ZNF785A8K8V0 405 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 VWC2LB2RUY7 222 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 GCOM1H8Y6P7 765 aaPredicted RBP4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 FZD9O00144 591 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 GABRDO14764 452 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 TRIAP1O43715 76 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 KATNA1O75449 491 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 TTLL1O95922 423 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 GJB1P08034 283 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 CDK11BP21127 795 aaKnown RBP4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 SMARCA1P28370 1054 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 CYP2C19P33261 490 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 ADKP55263 362 aaKnown RBP4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 SLC4A10Q6U841 1118 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 GLCCI1Q86VQ1 547 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 HASPINQ8TF76 798 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 TPSD1Q9BZJ3 242 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 SLAMF7Q9NQ25 335 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms