RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 TAS1R2Q8TE23 839 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 HASPINQ8TF76 798 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 GDPD5Q8WTR4 605 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 FAM81BQ96LP2 452 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 CDCA3Q99618 268 aaPredicted RBP12.62□□□□□ -0.39
SNHG1-221ENST00000544983 VN1R3Q9BXE9 311 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 EMILIN2Q9BXX0 1053 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 DNAI2Q9GZS0 605 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 PRDM12Q9H4Q4 367 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 FNIP2Q9P278 1114 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 CACNG4Q9UBN1 327 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 BACE2Q9Y5Z0 518 aa12.62□□□□□ -0.39
SNHG1-221ENST00000544983 EPOPA6NHQ4 379 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 F8W810 466 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 SPTLC1O15269 473 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 NCK2O43639 380 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 LILRB3O75022 631 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 TACC1O75410 805 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 CXCL14O95715 111 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 TRIM21P19474 475 aaKnown RBP12.61□□□□□ -0.39
SNHG1-221ENST00000544983 BRCC3P46736 316 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 LHX1P48742 406 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 YWHAHQ04917 246 aaPredicted RBP12.61□□□□□ -0.39
SNHG1-221ENST00000544983 CAMK1Q14012 370 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 MRPL58Q14197 206 aaKnown RBP12.61□□□□□ -0.39
SNHG1-221ENST00000544983 KRT31Q15323 416 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 FILIP1LQ4L180 1135 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 FKBP15Q5T1M5 1219 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 PPFIBP1Q86W92 1011 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 CEP57Q86XR8 500 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 THEM5Q8N1Q8 247 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 MMRN2Q9H8L6 949 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 CYP3A43Q9HB55 503 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 RXFP1Q9HBX9 757 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
SNHG1-221ENST00000544983 MYO7AQ13402 2215 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 PLXNA4Q9HCM2 1894 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 C2orf71A6NGG8 1288 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 OR6C75A6NL08 312 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 ADH1AP07327 375 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 TBXAS1P24557 533 aaPredicted RBP12.6□□□□□ -0.39
SNHG1-221ENST00000544983 DNAJB1P25685 340 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 PCSK1P29120 753 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 TKTP29401 623 aaKnown RBP12.6□□□□□ -0.39
SNHG1-221ENST00000544983 ERVFC1P60507 584 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 YWHAEP62258 255 aaKnown RBP12.6□□□□□ -0.39
SNHG1-221ENST00000544983 NOP14P78316 857 aaKnown RBP12.6□□□□□ -0.39
SNHG1-221ENST00000544983 SMARCB1Q12824 385 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 PTPN14Q15678 1187 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 MIIPQ5JXC2 388 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 VARS2Q5ST30 1063 aaKnown RBP12.6□□□□□ -0.39
SNHG1-221ENST00000544983 OVOS1Q6IE37 1185 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 ZNF280DQ6N043 979 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 TAS1R1Q7RTX1 841 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 LUZP1Q86V48 1076 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 LNX1Q8TBB1 728 aaPredicted RBP12.6□□□□□ -0.39
SNHG1-221ENST00000544983 RIN2Q8WYP3 895 aaPredicted RBP12.6□□□□□ -0.39
SNHG1-221ENST00000544983 JAKMIP2Q96AA8 810 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 MMS19Q96T76 1030 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 NIF3L1Q9GZT8 377 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 NSUN3Q9H649 340 aaKnown RBP12.6□□□□□ -0.39
SNHG1-221ENST00000544983 MTMR10Q9NXD2 777 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 MTRRQ9UBK8 725 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 DPP7Q9UHL4 492 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 MAFFQ9ULX9 164 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 DAAM1Q9Y4D1 1078 aa12.6□□□□□ -0.39
SNHG1-221ENST00000544983 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.59□□□□□ -0.39
SNHG1-221ENST00000544983 LGALS16A8MUM7 142 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 PES1O00541 588 aaKnown RBP12.59□□□□□ -0.39
SNHG1-221ENST00000544983 CLSTN1O94985 981 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 NDUFV1P49821 464 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 COPB1P53618 953 aaKnown RBP12.59□□□□□ -0.39
SNHG1-221ENST00000544983 PSMD5Q16401 504 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 SOWAHAQ2M3V2 549 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 HSP90AA4PQ58FG1 418 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 RTP2Q5QGT7 225 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 SLC8B1Q6J4K2 584 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 ELMSAN1Q6PJG2 1045 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 RTL10Q7L3V2 364 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 ENOSF1Q7L5Y1 443 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 ADGRF2Q8IZF7 708 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 PDCL2Q8N4E4 241 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 FAM84AQ96KN4 292 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 NT5C1BQ96P26 610 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 CDX2Q99626 313 aaPredicted RBP12.59□□□□□ -0.39
SNHG1-221ENST00000544983 BCO2Q9BYV7 579 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 PRDM6Q9NQX0 595 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 GCNT4Q9P109 453 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 NXF1Q9UBU9 619 aaKnown RBP12.59□□□□□ -0.39
SNHG1-221ENST00000544983 MTCH2Q9Y6C9 303 aa12.59□□□□□ -0.39
SNHG1-221ENST00000544983 PRRC2BQ5JSZ5 2229 aaKnown RBP12.58□□□□□ -0.39
SNHG1-221ENST00000544983 I3L4J1 428 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 RFXAPO00287 272 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 GABRDO14764 452 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 TBC1D4O60343 1298 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 TPM3P06753 285 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms