RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 TOP6BLQ8N6T0 577 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 C3orf58Q8NDZ4 430 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 TATDN2Q93075 761 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 ELMO3Q96BJ8 720 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 SENP8Q96LD8 212 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 SAMD11Q96NU1 681 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 EDEM3Q9BZQ6 932 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 NUCKS1Q9H1E3 243 aaKnown RBP12.73□□□□□ -0.37
DDB1-223ENST00000543658 SNX25Q9H3E2 840 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 SIX2Q9NPC8 291 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 IMPACTQ9P2X3 320 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 PCDHB8Q9UN66 801 aa12.73□□□□□ -0.37
DDB1-223ENST00000543658 LUC7L2Q9Y383 392 aaKnown RBP12.73□□□□□ -0.37
DDB1-223ENST00000543658 A0A1W2PQJ5 194 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 LINC01553A4QN01 128 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 GRXCR1A8MXD5 290 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 PTMAP06454 111 aaKnown RBP12.72□□□□□ -0.37
DDB1-223ENST00000543658 CA3P07451 260 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 CCDC172P0C7W6 258 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 KRT5P13647 590 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 CA8P35219 290 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 STAT1P42224 750 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 ASPAP45381 313 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 RAP1GAPP47736 663 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 APBA1Q02410 837 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 BMS1Q14692 1282 aaKnown RBP12.72□□□□□ -0.37
DDB1-223ENST00000543658 DRAP1Q14919 205 aaPredicted RBP12.72□□□□□ -0.37
DDB1-223ENST00000543658 TIGD5Q53EQ6 642 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 KIAA1841Q6NSI8 718 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 CNGA4Q8IV77 575 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 THEM5Q8N1Q8 247 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 SLC39A11Q8N1S5 342 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 OR6B3Q8NGW1 331 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 CLP1Q92989 425 aaKnown RBP12.72□□□□□ -0.37
DDB1-223ENST00000543658 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 IGSF21Q96ID5 467 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 SUSD3Q96L08 255 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 STK33Q9BYT3 514 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 BCO2Q9BYV7 579 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 FAM124BQ9H5Z6 455 aaPredicted RBP12.72□□□□□ -0.37
DDB1-223ENST00000543658 ZNHIT6Q9NWK9 470 aaKnown RBP12.72□□□□□ -0.37
DDB1-223ENST00000543658 MARCH5Q9NX47 278 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 PUF60Q9UHX1 559 aaKnown RBP12.72□□□□□ -0.37
DDB1-223ENST00000543658 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
DDB1-223ENST00000543658 LCHNA4D1U4 455 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 AKR1B15C9JRZ8 316 aaPredicted RBP12.71□□□□□ -0.37
DDB1-223ENST00000543658 I3L4J1 428 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 M0QZQ0 153 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 SYN3O14994 580 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 EPHB6O15197 1021 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 SPTLC1O15269 473 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 NRDCO43847 1150 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 GYPCP04921 128 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 ITGB1P05556 798 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 WEE2P0C1S8 567 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 TYMPP19971 482 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 CASP14P31944 242 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 LHX1P48742 406 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.37
DDB1-223ENST00000543658 GSDMDP57764 484 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 ZBED6P86452 979 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 YWHAHQ04917 246 aaPredicted RBP12.71□□□□□ -0.37
DDB1-223ENST00000543658 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 FAM171A1Q5VUB5 890 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 TMEM270Q6UE05 265 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.71□□□□□ -0.37
DDB1-223ENST00000543658 SPATA18Q8TC71 538 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 TGS1Q96RS0 853 aaKnown RBP12.71□□□□□ -0.37
DDB1-223ENST00000543658 ARID3AQ99856 593 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 SLC28A3Q9HAS3 691 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 CISHQ9NSE2 258 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 MYO6Q9UM54 1294 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 CAPN11Q9UMQ6 739 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 L1RE1Q9UN81 338 aa12.71□□□□□ -0.37
DDB1-223ENST00000543658 COL4A4P53420 1690 aaPredicted RBP12.7□□□□□ -0.38
DDB1-223ENST00000543658 A0A1W2PPC1 479 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 A8MXQ7 604 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 F8VZ95 297 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 F8W810 466 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 H7C4K7 107 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 TACC1O75410 805 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 FGF18O76093 207 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 NOL4O94818 638 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 URODP06132 367 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 FAM163BP0C2L3 166 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 MYOGP15173 224 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 WARSP23381 471 aaKnown RBP12.7□□□□□ -0.38
DDB1-223ENST00000543658 PCSK1P29120 753 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 KRT9P35527 623 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 BMPR1AP36894 532 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 ASIC2Q16515 512 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 SOWAHAQ2M3V2 549 aa12.7□□□□□ -0.38
DDB1-223ENST00000543658 USP41Q3LFD5 358 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms