RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PDXDC1Q6P996 788 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 HBS1LQ9Y450 684 aaKnown RBP11.91□□□□□ -0.5
CDH4-201ENST00000543233 KRIT1O00522 736 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 PLSCR1O15162 318 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 TLR2O60603 784 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 BAG6P46379 1132 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 RELAQ04206 551 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 KLHL30Q0D2K2 578 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 VPS52Q8N1B4 723 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 SYT2Q8N9I0 419 aaPredicted RBP11.91□□□□□ -0.5
CDH4-201ENST00000543233 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDH4-201ENST00000543233 NACC2Q96BF6 587 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 MAML3Q96JK9 1138 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 TTC1Q99614 292 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 TRIM51Q9BSJ1 452 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 PRKAG3Q9UGI9 489 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 HDAC9Q9UKV0 1011 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 MYH4Q9Y623 1939 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 MYO3BQ8WXR4 1341 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 TMEM120BA0PK00 339 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 BIRC5O15392 142 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 RNASEH1O60930 286 aaKnown RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 FAM13AO94988 1023 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 PSMG1O95456 288 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 TKTP29401 623 aaKnown RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 PPIDQ08752 370 aaKnown RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 SPIRE1Q08AE8 756 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 COG2Q14746 738 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 SLC9C1Q4G0N8 1177 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 WDR18Q9BV38 432 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 PITPNM3Q9BZ71 974 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 MKS1Q9NXB0 559 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 ARMCX3Q9UH62 379 aaPredicted RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 GPC6Q9Y625 555 aaPredicted RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 ABCB11O95342 1321 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 MROH7Q68CQ1 1323 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 ANKRD31Q8N7Z5 1873 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 GRID2IPA4D2P6 1211 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 SORBS3O60504 671 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 NOL4O94818 638 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 TFPTP0C1Z6 253 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 CYP2J2P51589 502 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 PSMC1P62191 440 aaKnown RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 AP3B2Q13367 1082 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 ACSBG2Q5FVE4 666 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 FAM186BQ8IYM0 893 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 DIS3LQ8TF46 1054 aaKnown RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 CAMKK2Q96RR4 588 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 FNBP1Q96RU3 617 aa11.9□□□□□ -0.5
CDH4-201ENST00000543233 ZNF70Q9UC06 446 aaPredicted RBP11.9□□□□□ -0.5
CDH4-201ENST00000543233 A0A087X0T9 212 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 GAS7O60861 476 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 AKAP3O75969 853 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 TPPPO94811 219 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 ZBTB7AO95365 584 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 FAM228BP0C875 321 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 ARP10275 920 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 PLTPP55058 493 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SLC29A2Q14542 456 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 C16orf72Q14CZ0 275 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 C4orf50Q6ZRC1 276 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 ADAT2Q7Z6V5 191 aaKnown RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 ARHGAP24Q8N264 748 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 STMN4Q9H169 189 aaPredicted RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 FZD1Q9UP38 647 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 PCDHA2Q9Y5H9 948 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SLX4Q8IY92 1834 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 KDM1AO60341 852 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 AGTP01019 485 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 RPA1P27694 616 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SREBF1P36956 1147 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 THOC5Q13769 683 aaKnown RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 CCDC25Q86WR0 208 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 GLT8D2Q9H1C3 349 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 ARMC7Q9H6L4 198 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 TBCCD1Q9NVR7 557 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 MOSPD1Q9UJG1 213 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SSX2IPQ9Y2D8 614 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SMIM31A0A1B0GVY4 71 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 A0A1W2PQJ5 194 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 MATN2O00339 956 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 RASGRF2O14827 1237 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 ATP6V1B1P15313 513 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 POLGP54098 1239 aaPredicted RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 CDK17Q00537 523 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 RPS6KA1Q15418 735 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms