RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PDK1Q15118 436 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 PRPF39Q86UA1 669 aaKnown RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 APPL2Q8NEU8 664 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 CALML6Q8TD86 181 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 ELMO2Q96JJ3 720 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 CST8O60676 142 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 IL18RAPO95256 599 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 RBP3P10745 1247 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 RASA1P20936 1047 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 MAPK7Q13164 816 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 TMEM132DQ14C87 1099 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 ADCK1Q86TW2 530 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 TJP2Q9UDY2 1190 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 MADDQ8WXG6 1647 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 UNC13BO14795 1591 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 ZCCHC11Q5TAX3 1644 aaKnown RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 RNF17Q9BXT8 1623 aaKnown RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 RFC5P40937 340 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 TKFCQ3LXA3 575 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 FIGNQ5HY92 759 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 CYB5D1Q6P9G0 228 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 LRRC34Q8IZ02 419 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 TMEM143Q96AN5 459 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 PAWRQ96IZ0 340 aaKnown RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 ZSWIM1Q9BR11 485 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 C20orf96Q9NUD7 363 aaPredicted RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 SPHKAPQ2M3C7 1700 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 ENO4A6NNW6 628 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 PJA2O43164 708 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 RGS7P49802 495 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 CYLC2Q14093 348 aaPredicted RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 PTPAQ15257 358 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 AASDHQ4L235 1098 aaPredicted RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 RBM43Q6ZSC3 357 aaKnown RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 CLEC4FQ8N1N0 589 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 ATPAF2Q8N5M1 289 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 EFHBQ8N7U6 833 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 SENP2Q9HC62 589 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
TNC-212ENST00000542877 ZSCAN9O15535 394 aaPredicted RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 MYCBPAPQ8TBZ2 947 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 SCFD2Q8WU76 684 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 GID8Q9NWU2 228 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 PRKAG2Q9UGJ0 569 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 EEF2KO00418 725 aaKnown RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 ACADSBP45954 432 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 HSPA13P48723 471 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 EMC2Q15006 297 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 CCDC92Q53HC0 331 aaPredicted RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 ZNF34Q8IZ26 560 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 NUP93Q8N1F7 819 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 PDP2Q9P2J9 529 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 NAGPAQ9UK23 515 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 NCOA3Q9Y6Q9 1424 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 EXTL3O43909 919 aa13.71□□□□□ -0.21
TNC-212ENST00000542877 KLF6Q99612 283 aaPredicted RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 FRMD8P1Q9BZ68 369 aaPredicted RBP13.71□□□□□ -0.21
TNC-212ENST00000542877 GPD1P21695 349 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 GRIN1Q05586 938 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 C6orf10Q5SRN2 563 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 STX19Q8N4C7 294 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 MDM1Q8TC05 714 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 KCNB2Q92953 911 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 L1RE1Q9UN81 338 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.22
TNC-212ENST00000542877 NPEPPSP55786 919 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 DMC1Q14565 340 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 MOSPD1Q9UJG1 213 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 POLIQ9UNA4 740 aa13.71□□□□□ -0.22
TNC-212ENST00000542877 IGSF9BQ9UPX0 1349 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 PSTPIP1O43586 416 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 ENTPD3O75355 529 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 ATP6V1E1P36543 226 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 CHI3L2Q15782 390 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 PLD3Q8IV08 490 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 TBC1D16Q8TBP0 767 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 NIF3L1Q9GZT8 377 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 IL25Q9H293 177 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 PRR12Q9ULL5 1215 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 MTSS1O43312 755 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 S100A5P33763 92 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 MRPS15P82914 257 aaKnown RBP13.7□□□□□ -0.22
TNC-212ENST00000542877 COG2Q14746 738 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 CYGBQ8WWM9 190 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 SEPT1Q8WYJ6 367 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 SH3KBP1Q96B97 665 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 MXRA8Q9BRK3 442 aa13.7□□□□□ -0.22
TNC-212ENST00000542877 NT5C1AQ9BXI3 368 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms