RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 STRA6Q9BX79 667 aa12.33□□□□□ -0.44
VTN-203ENST00000542029 TMEM206Q9H813 350 aa12.33□□□□□ -0.44
VTN-203ENST00000542029 TRPV5Q9NQA5 729 aa12.33□□□□□ -0.44
VTN-203ENST00000542029 CEP72Q9P209 647 aa12.33□□□□□ -0.44
VTN-203ENST00000542029 FRMD3A2A2Y4 597 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 PRR23AA6NEV1 266 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 MAN2B1O00754 1011 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 PPP6R2O75170 966 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 GCNT3O95395 438 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 DCNP07585 359 aaKnown RBP12.32□□□□□ -0.44
VTN-203ENST00000542029 MYL4P12829 197 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 IDEP14735 1019 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 PSMC3P17980 439 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 GARTP22102 1010 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 AMPD3Q01432 767 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 DUSP4Q13115 394 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 TANGO2Q6ICL3 276 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 CENPPQ6IPU0 288 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 FAM173BQ6P4H8 233 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 FRMD5Q7Z6J6 570 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 CCDC65Q8IXS2 484 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 ST13P5Q8NFI4 369 aaPredicted RBP12.32□□□□□ -0.44
VTN-203ENST00000542029 C2orf15Q8WU43 125 aaKnown RBP12.32□□□□□ -0.44
VTN-203ENST00000542029 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
VTN-203ENST00000542029 IRF7Q92985 503 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 SNX21Q969T3 373 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 CUEDC2Q9H467 287 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 BRD9Q9H8M2 597 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 TRPV4Q9HBA0 871 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 LTB4R2Q9NPC1 389 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 DPP3Q9NY33 737 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 DLGAP2Q9P1A6 1054 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 ZMYM5Q9UJ78 669 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 DOCK8Q8NF50 2099 aa12.32□□□□□ -0.44
VTN-203ENST00000542029 ZFHX2Q9C0A1 2572 aaPredicted RBP12.32□□□□□ -0.44
VTN-203ENST00000542029 PLXNA3P51805 1871 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 C2orf16Q68DN1 1984 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 MTMR11A4FU01 709 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 FAM170BA6NMN3 283 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 CYB561D2O14569 222 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 PPEF2O14830 753 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 SPTLC1O15269 473 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 SPTLC2O15270 562 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 OR4Q2P0C623 313 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 ADSSP30520 456 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 CCR2P41597 374 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 UBXN2BQ14CS0 331 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 SV2CQ496J9 727 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 C1orf228Q6PIY5 440 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 BRSK2Q8IWQ3 736 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 ATAD1Q8NBU5 361 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 LINC00301Q8NCQ3 95 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 TCEAL4Q96EI5 215 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 PGLYRP2Q96PD5 576 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 FOXQ1Q9C009 403 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 SLITRK6Q9H5Y7 841 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 PANK4Q9NVE7 773 aa12.31□□□□□ -0.44
VTN-203ENST00000542029 MTCL1Q9Y4B5 1905 aaKnown RBP12.31□□□□□ -0.44
VTN-203ENST00000542029 FAM186AA6NE01 2351 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 TISP43B9A030 160 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 EXTL3O43909 919 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 YEATS4O95619 227 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 GLULP15104 373 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 FCARP24071 287 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 RPS9P46781 194 aaKnown RBP12.3□□□□□ -0.44
VTN-203ENST00000542029 MLLT6P55198 1093 aaPredicted RBP12.3□□□□□ -0.44
VTN-203ENST00000542029 ARHGAP15Q53QZ3 475 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 CRELD2Q6UXH1 353 aaPredicted RBP12.3□□□□□ -0.44
VTN-203ENST00000542029 TPRG1Q6ZUI0 275 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 ASCL5Q7RTU5 278 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 DNAJB7Q7Z6W7 309 aaPredicted RBP12.3□□□□□ -0.44
VTN-203ENST00000542029 MFSD6LQ8IWD5 586 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 DCP1BQ8IZD4 617 aaKnown RBP12.3□□□□□ -0.44
VTN-203ENST00000542029 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 IQUBQ8NA54 791 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 ZSCAN18Q8TBC5 510 aaPredicted RBP12.3□□□□□ -0.44
VTN-203ENST00000542029 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 SPPL2BQ8TCT7 592 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 PSMG2Q969U7 264 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 PYM1Q9BRP8 204 aaKnown RBP12.3□□□□□ -0.44
VTN-203ENST00000542029 FAM213AQ9BRX8 229 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 PANK2Q9BZ23 570 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 ZCWPW1Q9H0M4 648 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 TBC1D7Q9P0N9 293 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 FBXO4Q9UKT5 387 aa12.3□□□□□ -0.44
VTN-203ENST00000542029 R3HCC1Q9Y3T6 440 aaKnown RBP12.3□□□□□ -0.44
VTN-203ENST00000542029 KMT2EQ8IZD2 1858 aa12.29□□□□□ -0.44
VTN-203ENST00000542029 ZNF263O14978 683 aa12.29□□□□□ -0.44
VTN-203ENST00000542029 LAMTOR5O43504 91 aa12.29□□□□□ -0.44
VTN-203ENST00000542029 MOSPD3O75425 235 aa12.29□□□□□ -0.44
VTN-203ENST00000542029 VNN2O95498 520 aa12.29□□□□□ -0.44
VTN-203ENST00000542029 LMNAP02545 664 aaKnown RBP12.29□□□□□ -0.44
VTN-203ENST00000542029 HSP90AA1P07900 732 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms